RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 FANCCQ00597 558 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 GCNT1Q02742 428 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 PRKCQQ04759 706 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 SYCP1Q15431 976 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 FKBP15Q5T1M5 1219 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 PARM1Q6UWI2 310 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 UNC93AQ86WB7 457 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 TCEAL8Q8IYN2 117 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 CRYBG2Q8N1P7 616 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 SLC4A11Q8NBS3 891 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 MYCBPAPQ8TBZ2 947 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 FGF14Q92915 247 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 PCED1BQ96HM7 432 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 RBSNQ9H1K0 784 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 CDH7Q9ULB5 785 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 SIK3Q9Y2K2 1263 aa22.82■■□□□ 1.24
R3HDM4-206ENST00000590454 RNF225M0QZC1 329 aaPredicted RBP22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 CLDN5O00501 218 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 PRRG1O14668 218 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 EPHB6O15197 1021 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 TBXAS1P24557 533 aaPredicted RBP22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 CYP2F1P24903 491 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 TPM4P67936 248 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 LIN9Q5TKA1 542 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 KLHDC7AQ5VTJ3 777 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 IQCEQ6IPM2 695 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 MTSS1LQ765P7 747 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 ATRIPQ8WXE1 791 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 SECISBP2LQ93073 1101 aaKnown RBP22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 DDX23Q9BUQ8 820 aaKnown RBP22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 NT5C1AQ9BXI3 368 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 B3GNT5Q9BYG0 378 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 OSBPL6Q9BZF3 934 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 FAM49BQ9NUQ9 324 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 PCDHB5Q9Y5E4 795 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 PCDHGA2Q9Y5H1 932 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 INSL5Q9Y5Q6 135 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 FHOD1Q9Y613 1164 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 DMXL1Q9Y485 3027 aa22.81■■□□□ 1.24
R3HDM4-206ENST00000590454 A0A1B0GTH6 734 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 CCL16O15467 120 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 KRT37O76014 449 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 NOL4O94818 638 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 SERPINC1P01008 464 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 CCDC130P13994 396 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 ELF1P32519 619 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 GPR15P49685 360 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 CACNA2D1P54289 1103 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 CYP27A1Q02318 531 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 MLF2Q15773 248 aaPredicted RBP22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 ARHGAP44Q17R89 818 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 SLC44A4Q53GD3 710 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 PAQR9Q6ZVX9 377 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 GRASPQ7Z6J2 395 aaPredicted RBP22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 ZNF518BQ9C0D4 1074 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 GANQ9H2C0 597 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 TMEM30AQ9NV96 361 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 DNAJC12Q9UKB3 198 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 YIPF1Q9Y548 306 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 PCDHB4Q9Y5E5 795 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 DNAH14Q0VDD8 3507 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 PTPRDP23468 1912 aa22.8■■□□□ 1.24
R3HDM4-206ENST00000590454 DOCK6Q96HP0 2047 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 DOCK8Q8NF50 2099 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 PNMA6AP0CW24 399 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 HAPLN1P10915 354 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 BDNFP23560 247 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 MAGEA9P43362 315 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 PFKPQ01813 784 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 CSTF1Q05048 431 aaKnown RBP22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 UBXN2BQ14CS0 331 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 NFE2Q16621 373 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 PPM1LQ5SGD2 360 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 SDHAF4Q5VUM1 108 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 TMEM270Q6UE05 265 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 SPATA2LQ8IUW3 424 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 STKLD1Q8NE28 680 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 TNIP3Q96KP6 325 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 SEPT5Q99719 369 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 FAM207AQ9NSI2 230 aaPredicted RBP22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 FANCMQ8IYD8 2048 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 OTOGLQ3ZCN5 2332 aa22.79■■□□□ 1.24
R3HDM4-206ENST00000590454 FAM170BA6NMN3 283 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 HNRNPA1P09651 372 aaKnown RBP eCLIP22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 ATXN1P54253 815 aaKnown RBP22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 TWF1Q12792 350 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 NR1I3Q14994 352 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 UVSSAQ2YD98 709 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 MGAT5BQ3V5L5 792 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 FUKQ8N0W3 1084 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 SPPL2BQ8TCT7 592 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 C2orf15Q8WU43 125 aaKnown RBP22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 TMEM176AQ96HP8 235 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 ERGIC2Q96RQ1 377 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 NAA15Q9BXJ9 866 aaKnown RBP22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 PLCB1Q9NQ66 1216 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 IFNKQ9P0W0 207 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 MAFFQ9ULX9 164 aa22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 MTF2Q9Y483 593 aaPredicted RBP22.78■■□□□ 1.24
R3HDM4-206ENST00000590454 PRR5-ARHGAP8B1AHC4 643 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms