RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 MTMR3Q13615 1198 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 CLEC20AQ6ZU45 233 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 GET4Q7L5D6 327 aaPredicted RBP23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 SLC47A2Q86VL8 602 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 FAM71AQ8IYT1 594 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 PSMG2Q969U7 264 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 KCNK16Q96T55 309 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 SMOQ99835 787 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 FAM50BQ9Y247 325 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 NOTCH4Q99466 2003 aa23.76■■□□□ 1.39
R3HDM4-205ENST00000589445 MED7O43513 233 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 MICAL2O94851 1124 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 RHOP08100 348 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 SP100P23497 879 aaPredicted RBP23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 SOX5P35711 763 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 PBX1P40424 430 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 STAT1P42224 750 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 ARID5AQ03989 594 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 STILQ15468 1287 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 SARM1Q6SZW1 724 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 CYP26C1Q6V0L0 522 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 PDZD4Q76G19 769 aaPredicted RBP23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 TTC30AQ86WT1 665 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 HS6ST3Q8IZP7 471 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 UBA3Q8TBC4 463 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 C8orf48Q96LL4 319 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 NECTIN4Q96NY8 510 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 GCNAQ96QF7 691 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 ZSWIM1Q9BR11 485 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 POMKQ9H5K3 350 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 DNMT3BQ9UBC3 853 aaKnown RBP23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 ASB3Q9Y575 518 aa23.75■■□□□ 1.39
R3HDM4-205ENST00000589445 DENND4CQ5VZ89 1909 aa23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 BEST1O76090 585 aa23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 CSH1P0DML2 217 aa23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 CSH2P0DML3 217 aa23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 PTPN2P17706 415 aa23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 BST2Q10589 180 aaKnown RBP23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 DNAJB7Q7Z6W7 309 aaPredicted RBP23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 ZNF334Q9HCZ1 680 aaPredicted RBP23.74■■□□□ 1.39
R3HDM4-205ENST00000589445 AP5Z1O43299 807 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 IL9P15248 144 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 CLCN1P35523 988 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 BPIFB4P59827 614 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 PUS10Q3MIT2 529 aaKnown RBP23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 CYP4A22Q5TCH4 519 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 TAF3Q5VWG9 929 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 LCLAT1Q6UWP7 414 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 DENND5BQ6ZUT9 1274 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 PASD1Q8IV76 773 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 ANKRD52Q8NB46 1076 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 ZMIZ2Q8NF64 920 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 ING5Q8WYH8 240 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 SUSD6Q92537 303 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 SPATA17Q96L03 361 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 NUP58Q9BVL2 599 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 DUSP16Q9BY84 665 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 PDCL3Q9H2J4 239 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 ITIH6Q6UXX5 1313 aa23.73■■□□□ 1.39
R3HDM4-205ENST00000589445 TCF20Q9UGU0 1960 aaKnown RBP23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 BDP1A6H8Y1 2624 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 LRRC53A6NM62 1247 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 SETSIPP0DME0 302 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 FSHRP23945 695 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 SLC5A3P53794 718 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 PDE4CQ08493 712 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 SLC5A9Q2M3M2 681 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 GPRIN1Q7Z2K8 1008 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 TMC8Q8IU68 726 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 CPLX3Q8WVH0 158 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 SECISBP2LQ93073 1101 aaKnown RBP23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 CSNK1G1Q9HCP0 422 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 WDR6Q9NNW5 1121 aaKnown RBP23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 MRPS23Q9Y3D9 190 aaKnown RBP23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 HCN4Q9Y3Q4 1203 aa23.72■■□□□ 1.39
R3HDM4-205ENST00000589445 PAPLNO95428 1278 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 CYP11B1P15538 503 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 GABRR2P28476 465 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 CNGA2Q16280 664 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 ASIC2Q16515 512 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 SPECC1LQ69YQ0 1117 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 DENND1BQ6P3S1 775 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 NUP93Q8N1F7 819 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 LEMD2Q8NC56 503 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 EPS8L1Q8TE68 723 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 ZNF606Q8WXB4 792 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 BAP1Q92560 729 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 TTYH3Q9C0H2 523 aa23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 ARIH1Q9Y4X5 557 aaPredicted RBP23.71■■□□□ 1.39
R3HDM4-205ENST00000589445 A0A1W2PRU2 124 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 TULP2O00295 520 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 HMGA1P17096 107 aaKnown RBP23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 GJA1P17302 382 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 CEBPBP17676 345 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 GBP2P32456 591 aaPredicted RBP23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 KRT9P35527 623 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 RGS7P49802 495 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 USP46P62068 366 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms