RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ARHGAP17Q68EM7 881 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 TMEM270Q6UE05 265 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 CLEC20AQ6ZU45 233 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 DENND5BQ6ZUT9 1274 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 RSAD2Q8WXG1 361 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 TTLL2Q9BWV7 592 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 DNAI2Q9GZS0 605 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 ATXN3LQ9H3M9 355 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 AJAP1Q9UKB5 411 aaPredicted RBP21.42■■□□□ 1.02
DDX39A-207ENST00000588542 CNTN6Q9UQ52 1028 aa21.42■■□□□ 1.02
DDX39A-207ENST00000588542 LRRC10BA6NIK2 292 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 SMTNL1A8MU46 457 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 PES1O00541 588 aaKnown RBP21.41■■□□□ 1.02
DDX39A-207ENST00000588542 FAM200BP0CF97 657 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 ATP1A3P13637 1013 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 CDC25CP30307 473 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 ZNF132P52740 706 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 COPB1P53618 953 aaKnown RBP21.41■■□□□ 1.02
DDX39A-207ENST00000588542 MAP3K7CLP57077 242 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 CYP4F8P98187 520 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 PTPN21Q16825 1174 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 PARM1Q6UWI2 310 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 FGF14Q92915 247 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 JAKMIP2Q96AA8 810 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 IGSF9Q9P2J2 1179 aa21.41■■□□□ 1.02
DDX39A-207ENST00000588542 UXTQ9UBK9 157 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-207ENST00000588542 HELZP42694 1942 aaKnown RBP21.41■■□□□ 1.02
DDX39A-207ENST00000588542 HHLA1C9JL84 531 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 PAEPP09466 180 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 FCARP24071 287 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 FAM78AQ5JUQ0 283 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 ENOSF1Q7L5Y1 443 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 NUP93Q8N1F7 819 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 RBBP8NLQ8NC74 664 aaPredicted RBP21.4■■□□□ 1.02
DDX39A-207ENST00000588542 NXPE3Q969Y0 559 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 ASB16Q96NS5 453 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 RPP25Q9BUL9 199 aaKnown RBP21.4■■□□□ 1.02
DDX39A-207ENST00000588542 DUSP16Q9BY84 665 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 CBX8Q9HC52 389 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 IL37Q9NZH6 218 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 NUMBLQ9Y6R0 609 aa21.4■■□□□ 1.02
DDX39A-207ENST00000588542 PI4K2BG5E9Z4 385 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 DCXO43602 365 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 CALCAP01258 141 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 VDRP11473 427 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 CDK11BP21127 795 aaKnown RBP21.39■■□□□ 1.01
DDX39A-207ENST00000588542 MFAP3P55082 362 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 SGO2Q562F6 1265 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 GPR158Q5T848 1215 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 MTSS1LQ765P7 747 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 SCAMP5Q8TAC9 235 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 TFAP2BQ92481 460 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 FAM81BQ96LP2 452 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 GCNAQ96QF7 691 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 ZSWIM1Q9BR11 485 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 GPR88Q9GZN0 384 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 SMOC2Q9H3U7 446 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 KIAA1257Q9ULG3 409 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 SORCS3Q9UPU3 1222 aa21.39■■□□□ 1.01
DDX39A-207ENST00000588542 BECN2A8MW95 431 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 CD19P15391 556 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 NPR3P17342 541 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 SLC5A3P53794 718 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 ARHGAP44Q17R89 818 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 ARHGAP15Q53QZ3 475 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 TANGO2Q6ICL3 276 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 GPRIN1Q7Z2K8 1008 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 TTC30AQ86WT1 665 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 SLC44A3Q8N4M1 653 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 ANKRD52Q8NB46 1076 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 ZSCAN18Q8TBC5 510 aaPredicted RBP21.38■■□□□ 1.01
DDX39A-207ENST00000588542 SHC3Q92529 594 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 SMARCD2Q92925 531 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 SLC46A2Q9BY10 475 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 SLITRK6Q9H5Y7 841 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 TASP1Q9H6P5 420 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 TRPV4Q9HBA0 871 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 DNAJC12Q9UKB3 198 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 TSPAN16Q9UKR8 245 aa21.38■■□□□ 1.01
DDX39A-207ENST00000588542 KIF26AQ9ULI4 1882 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-207ENST00000588542 NCANO14594 1321 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 LGALS16A8MUM7 142 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 O00370 1275 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 RTN3O95197 1032 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-207ENST00000588542 TPM2P07951 284 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 TDGQ13569 410 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 GOLGA7BQ2TAP0 167 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 KLHDC7AQ5VTJ3 777 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 TXNDC8Q6A555 127 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 ANKRD20A12PQ8NF67 263 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 KXD1Q9BQD3 176 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 LSM14BQ9BX40 385 aaKnown RBP21.37■■□□□ 1.01
DDX39A-207ENST00000588542 PLA2G2FQ9BZM2 168 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 EPHX3Q9H6B9 360 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 PNPLA8Q9NP80 782 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 EHD2Q9NZN4 543 aa21.37■■□□□ 1.01
DDX39A-207ENST00000588542 TECTAO75443 2155 aa21.36■■□□□ 1.01
DDX39A-207ENST00000588542 FAM92AA1XBS5 289 aa21.36■■□□□ 1.01
DDX39A-207ENST00000588542 ECI2O75521 394 aa21.36■■□□□ 1.01
DDX39A-207ENST00000588542 KRT5P13647 590 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms