RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 RPL10AP62906 217 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 MRPS21P82921 87 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 RPL6Q02878 288 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 GNL2Q13823 731 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 BYSLQ13895 437 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 HNRNPDQ14103 355 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 TRIP6Q15654 476 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 NFE2Q16621 373 aaPredicted RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 MAP7D1Q3KQU3 841 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 SPDYCQ5MJ68 293 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 PEAR1Q5VY43 1037 aaPredicted RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 CD302Q8IX05 232 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 C4orf32Q8N8J7 132 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 IGSF22Q8N9C0 903 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 IL17RCQ8NAC3 791 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 MDM1Q8TC05 714 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 SPATA18Q8TC71 538 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 TRMT2BQ96GJ1 504 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 GBP4Q96PP9 640 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 CAPN10Q9HC96 672 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 NOL7Q9UMY1 257 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 MTMR6Q9Y217 621 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 PCDHB9Q9Y5E1 797 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 ADAMTS9Q9P2N4 1935 aa9.19□□□□□ -0.94
SDF2-204ENST00000587338 URB1O60287 2271 aaKnown RBP9.19□□□□□ -0.94
SDF2-204ENST00000587338 A0A0B4J269 797 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 NPHP3-ACAD11A0A0J9YXS1 232 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 MYMKA6NI61 221 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 KPNA7A9QM74 516 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 K7ENM7 598 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 TULP1O00294 542 aaPredicted RBP9.18□□□□□ -0.94
SDF2-204ENST00000587338 ARHGAP33O14559 1287 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
SDF2-204ENST00000587338 KAT7O95251 611 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 F13A1P00488 732 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 APODP05090 189 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 CYP17A1P05093 508 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 ADRB2P07550 413 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 PDIA4P13667 645 aaKnown RBP9.18□□□□□ -0.94
SDF2-204ENST00000587338 HDCP19113 662 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 ACAT1P24752 427 aaKnown RBP9.18□□□□□ -0.94
SDF2-204ENST00000587338 SLC6A11P48066 632 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 ACOT2P49753 483 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 NCKAP1LP55160 1127 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 KDSRQ06136 332 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 ZNF33AQ06730 810 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 MESP2Q0VG99 397 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 GAB4Q2WGN9 574 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 SV2CQ496J9 727 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 EOGTQ5NDL2 527 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 EMC10Q5UCC4 262 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 RABEPKQ7Z6M1 372 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 SCN4BQ8IWT1 228 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 FSIP1Q8NA03 581 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 ADAMTS14Q8WXS8 1223 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 MYRFLQ96LU7 910 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 PLIN2Q99541 437 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 CCSER1Q9C0I3 900 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 FOXP1Q9H334 677 aaPredicted RBP9.18□□□□□ -0.94
SDF2-204ENST00000587338 DPP3Q9NY33 737 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 GCNT4Q9P109 453 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 LARSQ9P2J5 1176 aaKnown RBP9.18□□□□□ -0.94
SDF2-204ENST00000587338 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
SDF2-204ENST00000587338 ARHGAP26Q9UNA1 814 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 DERAQ9Y315 318 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 ZDHHC9Q9Y397 364 aa9.18□□□□□ -0.94
SDF2-204ENST00000587338 MYH11P35749 1972 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 TCHHQ07283 1943 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 LEFTY2O00292 366 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 ADAM23O75077 832 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 PIGRP01833 764 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 SYPP08247 313 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 TCF3P15923 654 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 TRAPPC10P48553 1259 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 ATP2C1P98194 919 aaPredicted RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 RESTQ13127 1097 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 DHCR24Q15392 516 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 CCDC142Q17RM4 750 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 PLEKHG6Q3KR16 790 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 HSF5Q4G112 596 aaPredicted RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 INTS6LQ5JSJ4 861 aaKnown RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 SLC36A4Q6YBV0 504 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 CCNI2Q6ZMN8 369 aaPredicted RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 FILIP1Q7Z7B0 1213 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 C12orf40Q86WS4 652 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 NAXDQ8IW45 347 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 PDCL2Q8N4E4 241 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 ADAM32Q8TC27 787 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 LRRC15Q8TF66 581 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 LEO1Q8WVC0 666 aaPredicted RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 HSPA12BQ96MM6 686 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 ZNF560Q96MR9 790 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 PNKPQ96T60 521 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 MMTAG2Q9BU76 263 aaKnown RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 ASB7Q9H672 318 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 ABCB6Q9NP58 842 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 ARHGEF4Q9NR80 690 aa9.17□□□□□ -0.94
SDF2-204ENST00000587338 DNAAF2Q9NVR5 837 aaKnown RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 APOBEC2Q9Y235 224 aaKnown RBP9.17□□□□□ -0.94
SDF2-204ENST00000587338 C2CD2Q9Y426 696 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms