RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 HNRNPA1P09651 372 aaKnown RBP eCLIP17.7■□□□□ 0.42
GCDH-203ENST00000585420 TNFAIP3P21580 790 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 BRD2P25440 801 aaKnown RBP17.7■□□□□ 0.42
GCDH-203ENST00000585420 HOXA9P31269 272 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 MTHFRP42898 656 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 CDR2Q01850 454 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 ASTE1Q2TB18 679 aaPredicted RBP17.7■□□□□ 0.42
GCDH-203ENST00000585420 INTS6LQ5JSJ4 861 aaKnown RBP17.7■□□□□ 0.42
GCDH-203ENST00000585420 TOGARAM2Q6ZUX3 1019 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 ACOT1Q86TX2 421 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 TTC9BQ8N6N2 239 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 UHRF1Q96T88 793 aaPredicted RBP17.7■□□□□ 0.42
GCDH-203ENST00000585420 DESI2Q9BSY9 194 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 PDCL3Q9H2J4 239 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 PIDD1Q9HB75 910 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 GTF3C4Q9UKN8 822 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 INSL5Q9Y5Q6 135 aa17.7■□□□□ 0.42
GCDH-203ENST00000585420 MYBPHLA2RUH7 354 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 ATP2C2O75185 946 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 SP100P23497 879 aaPredicted RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 ANXA13P27216 316 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 PSMC1P62191 440 aaKnown RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 TSPY1Q01534 308 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 RTL10Q7L3V2 364 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 ZNF677Q86XU0 584 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 DDX1Q92499 740 aaKnown RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 NECTIN4Q96NY8 510 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 PKMYT1Q99640 499 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 SYT11Q9BT88 431 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 PHF7Q9BWX1 381 aaPredicted RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 RHOBTB2Q9BYZ6 727 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 DPEP3Q9H4B8 488 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 MAFFQ9ULX9 164 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 ZKSCAN5Q9Y2L8 839 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 C2orf16Q68DN1 1984 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 A0A087X0T9 212 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 SOAT2O75908 522 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 FAM228BP0C875 321 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 PCSK1P29120 753 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 SSTR3P32745 418 aaPredicted RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 ZP2Q05996 745 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 TWF1Q12792 350 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 SPA17Q15506 151 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 SLC18A3Q16572 532 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 GRASPQ7Z6J2 395 aaPredicted RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 ADHFE1Q8IWW8 467 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 DCP1BQ8IZD4 617 aaKnown RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 ZNF606Q8WXB4 792 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 TFAP2BQ92481 460 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 RPGRIP1Q96KN7 1286 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 TNIP3Q96KP6 325 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
GCDH-203ENST00000585420 HCFC1R1Q9NWW0 138 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 PRKAG3Q9UGI9 489 aa17.69■□□□□ 0.42
GCDH-203ENST00000585420 EIF3CLB5ME19 914 aaKnown RBP17.68■□□□□ 0.42
GCDH-203ENST00000585420 DDX3XO00571 662 aaKnown RBP eCLIP17.68■□□□□ 0.421e-7■■□□□ 11.8
GCDH-203ENST00000585420 MED7O43513 233 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 LRG1P02750 347 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 VDRP11473 427 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 CHRNB2P17787 502 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 FMO1Q01740 532 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 SGO2Q562F6 1265 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 C12orf29Q8N999 325 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 ACRBPQ8NEB7 543 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 EIF3CQ99613 913 aaKnown RBP17.68■□□□□ 0.42
GCDH-203ENST00000585420 LPIN3Q9BQK8 851 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 SYT15Q9BQS2 421 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 WDR6Q9NNW5 1121 aaKnown RBP17.68■□□□□ 0.42
GCDH-203ENST00000585420 CD320Q9NPF0 282 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 CRTAC1Q9NQ79 661 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 ABI2Q9NYB9 513 aaPredicted RBP17.68■□□□□ 0.42
GCDH-203ENST00000585420 CDH9Q9ULB4 789 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 YIPF1Q9Y548 306 aa17.68■□□□□ 0.42
GCDH-203ENST00000585420 XYLBO75191 536 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 NTHL1P78549 312 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 CYP27A1Q02318 531 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 FAM171BQ6P995 826 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 PASD1Q8IV76 773 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 B3GALNT2Q8NCR0 500 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 OLIG1Q8TAK6 271 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 ZSWIM1Q9BR11 485 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 DNMT3BQ9UBC3 853 aaKnown RBP17.67■□□□□ 0.42
GCDH-203ENST00000585420 KIAA1257Q9ULG3 409 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 FAM170AA1A519 330 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 POU2F2P09086 479 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 KRT83P78385 493 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 SMARCB1Q12824 385 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 NFE2Q16621 373 aaPredicted RBP17.67■□□□□ 0.42
GCDH-203ENST00000585420 MGAT5BQ3V5L5 792 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 CRYBG2Q8N1P7 616 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 SLC30A5Q8TAD4 765 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 SPPL2BQ8TCT7 592 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 C2orf15Q8WU43 125 aaKnown RBP17.67■□□□□ 0.42
GCDH-203ENST00000585420 PCDHB18PQ96TA0 734 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 SEPT5Q99719 369 aaPredicted RBP17.67■□□□□ 0.42
GCDH-203ENST00000585420 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.67■□□□□ 0.42
GCDH-203ENST00000585420 NAGPAQ9UK23 515 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 PCDHB5Q9Y5E4 795 aa17.67■□□□□ 0.42
GCDH-203ENST00000585420 CLUHO75153 1309 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms