RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
ERBB2-217ENST00000584099 SMG9Q9H0W8 520 aaKnown RBP13.82□□□□□ -0.2
ERBB2-217ENST00000584099 KCTD10Q9H3F6 313 aa13.82□□□□□ -0.2
ERBB2-217ENST00000584099 DLL3Q9NYJ7 618 aa13.82□□□□□ -0.2
ERBB2-217ENST00000584099 SERTAD1Q9UHV2 236 aa13.82□□□□□ -0.2
ERBB2-217ENST00000584099 GMEB2Q9UKD1 530 aa13.82□□□□□ -0.2
ERBB2-217ENST00000584099 DCHS1Q96JQ0 3298 aa13.82□□□□□ -0.2
ERBB2-217ENST00000584099 FANCMQ8IYD8 2048 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 ZNF840PA6NDX5 716 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 A8MXQ7 604 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 SLC9A3R1O14745 358 aaPredicted RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 ATP2C2O75185 946 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 C4BPAP04003 597 aaKnown RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 RETP07949 1114 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 PDGFRBP09619 1106 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 TRIM21P19474 475 aaKnown RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 SYKP43405 635 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 MCCD1P59942 119 aaPredicted RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 MYL6P60660 151 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 PSMC1P62191 440 aaKnown RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 SLC7A9P82251 487 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 CYP27A1Q02318 531 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 NCOA4Q13772 614 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 PON2Q15165 354 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 KMT5BQ4FZB7 885 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 ZNF667Q5HYK9 610 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 SDHAF4Q5VUM1 108 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 UNC93AQ86WB7 457 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 DDX42Q86XP3 938 aaKnown RBP eCLIP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 FAXDC2Q96IV6 333 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 FAM84AQ96KN4 292 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 SLITRK1Q96PX8 696 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 MRPL45Q9BRJ2 306 aaKnown RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 EBF3Q9H4W6 596 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 ECT2Q9H8V3 914 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 DUS2Q9NX74 493 aaKnown RBP13.81□□□□□ -0.2
ERBB2-217ENST00000584099 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
ERBB2-217ENST00000584099 COL4A3Q01955 1670 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 NFATC1O95644 943 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 NR3C1P04150 777 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 CASP1P29466 404 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 GJA4P35212 333 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 IFNAR2P48551 515 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 TUBP50607 506 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 BIRC3Q13489 604 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 ZNF699Q32M78 642 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 EML3Q32P44 896 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 ZACNQ401N2 412 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 MDH1BQ5I0G3 518 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 WDR44Q5JSH3 913 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 SNX30Q5VWJ9 437 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 TDRD10Q5VZ19 366 aaKnown RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 INTS8Q75QN2 995 aaKnown RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 WDR5BQ86VZ2 330 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 KIAA2013Q8IYS2 634 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 LOXL4Q96JB6 756 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 P2RY13Q9BPV8 354 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 DNAI2Q9GZS0 605 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 FAM124BQ9H5Z6 455 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 TRPC7Q9HCX4 862 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 RBM12Q9NTZ6 932 aaKnown RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 IL37Q9NZH6 218 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 PATJQ8NI35 1801 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 NUP210Q8TEM1 1887 aaPredicted RBP13.8□□□□□ -0.2
ERBB2-217ENST00000584099 DNAH14Q0VDD8 3507 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 DMXL1Q9Y485 3027 aa13.8□□□□□ -0.2
ERBB2-217ENST00000584099 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 FAM92AA1XBS5 289 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 OTOL1A6NHN0 477 aaPredicted RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 LRRIQ3A6PVS8 624 aaPredicted RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 F8VP50 259 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 HCRTO43612 131 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 OAS1P00973 400 aaKnown RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 RPL13P26373 211 aaKnown RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 EIF2DP41214 584 aaKnown RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 CCDC142Q17RM4 750 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 FSTL4Q6MZW2 842 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 Q6ZS52 159 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 NUP93Q8N1F7 819 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 CRYBG2Q8N1P7 616 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 STKLD1Q8NE28 680 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 SH3RF2Q8TEC5 729 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 ACDQ96AP0 544 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 RMDN1Q96DB5 314 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 OTUB2Q96DC9 234 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 CHFRQ96EP1 664 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 SLC22A12Q96S37 553 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 CYP2S1Q96SQ9 504 aa13.79□□□□□ -0.2
ERBB2-217ENST00000584099 GTPBP4Q9BZE4 634 aaKnown RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
ERBB2-217ENST00000584099 ASS1P00966 412 aaKnown RBP13.78□□□□□ -0.2
ERBB2-217ENST00000584099 ARSAP15289 507 aa13.78□□□□□ -0.2
ERBB2-217ENST00000584099 TGM1P22735 817 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms