RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 ANKRD1Q15327 319 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 CCNG2Q16589 344 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 AMOTQ4VCS5 1084 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 SLC10A5Q5PT55 438 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 CFAP58Q5T655 872 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 VPS53Q5VIR6 699 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 SPATA1Q5VX52 437 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 ITPRIPL1Q6GPH6 555 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 IRGCQ6NXR0 463 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 UNC5DQ6UXZ4 953 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 GRASPQ7Z6J2 395 aaPredicted RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 IQCA1Q86XH1 822 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 SLC44A2Q8IWA5 706 aaPredicted RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 TEX11Q8IYF3 940 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 FAM186BQ8IYM0 893 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 RNF168Q8IYW5 571 aaPredicted RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 TMEM132CQ8N3T6 1108 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 TRIML1Q8N9V2 468 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 KIAA1524Q8TCG1 905 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 HDAC2Q92769 488 aaKnown RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 ARHGEF2Q92974 986 aaKnown RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 FUBP1Q96AE4 644 aaKnown RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 TIFAQ96CG3 184 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 FUBP3Q96I24 572 aaKnown RBP eCLIP4.45□□□□□ -1.7
SMG8-205ENST00000580798 HIC2Q96JB3 615 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 SPATA17Q96L03 361 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 UROC1Q96N76 676 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 MOGAT1Q96PD6 335 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 GTPBP4Q9BZE4 634 aaKnown RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 QRSL1Q9H0R6 528 aaKnown RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 OSBPL5Q9H0X9 879 aaPredicted RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 VPS33BQ9H267 617 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 IFT22Q9H7X7 185 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 ZWILCHQ9H900 591 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 BCO1Q9HAY6 547 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 SMYD2Q9NRG4 433 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 BLOC1S4Q9NUP1 217 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 ASB6Q9NWX5 421 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 SLC17A6Q9P2U8 582 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 LRIT1Q9P2V4 623 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 ARPP21Q9UBL0 812 aaPredicted RBP4.45□□□□□ -1.7
SMG8-205ENST00000580798 DKK3Q9UBP4 350 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 ATP6V0A2Q9Y487 856 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 SPEF1Q9Y4P9 236 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 TRIM17Q9Y577 477 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 PAXBP1Q9Y5B6 917 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 KAT6AQ92794 2004 aa4.45□□□□□ -1.7
SMG8-205ENST00000580798 A0A1B0GTW7 788 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 CCDC78A2IDD5 438 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 CASQ2O14958 399 aaPredicted RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 ULK1O75385 1050 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 BBOX1O75936 387 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 LETM1O95202 739 aaPredicted RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 RAP2AP10114 183 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 EEF2P13639 858 aaKnown RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 GLULP15104 373 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 RPS2P15880 293 aaKnown RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 HOXD10P28358 340 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 SMARCA1P28370 1054 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 SERPINB3P29508 390 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 ECHS1P30084 290 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 HSPA1LP34931 641 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 HOXD12P35452 270 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 SREBF1P36956 1147 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 HSD17B7P56937 341 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 EVCP57679 992 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 MRPS9P82933 396 aaKnown RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 CCDC15Q0P6D6 951 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 SP140Q13342 867 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 TNIP1Q15025 636 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 ADRM1Q16186 407 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 SPDYE7PQ495Y7 208 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 AFMIDQ63HM1 303 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 AP1ARQ63HQ0 302 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 CCBE1Q6UXH8 406 aaPredicted RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 BRINP3Q76B58 766 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 FASTKD5Q7L8L6 764 aaKnown RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 RNF180Q86T96 592 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 CMIPQ8IY22 773 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 UBR7Q8N806 425 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 IL17REQ8NFR9 667 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 BICD2Q8TD16 824 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 ACTRT2Q8TDY3 377 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 TGFBRAP1Q8WUH2 860 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 POF1BQ8WVV4 589 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 AUTS2Q8WXX7 1259 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 JAKMIP2Q96AA8 810 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 RNF31Q96EP0 1072 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 CFAP36Q96G28 342 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 CNDP2Q96KP4 475 aaKnown RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 UHRF1Q96T88 793 aaPredicted RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 NELL2Q99435 816 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 MYD88Q99836 296 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 TCHPQ9BT92 498 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 MRI1Q9BV20 369 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 RTFDC1Q9BY42 306 aaPredicted RBP4.44□□□□□ -1.7
SMG8-205ENST00000580798 RNPEPQ9H4A4 650 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 DMRT3Q9NQL9 472 aa4.44□□□□□ -1.7
SMG8-205ENST00000580798 IL17RBQ9NRM6 502 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms