RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 TMEM30AQ9NV96 361 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 SMPD4Q9NXE4 827 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 UXTQ9UBK9 157 aaPredicted RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 CDH9Q9ULB4 789 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 MORC2Q9Y6X9 1032 aaPredicted RBP9.55□□□□□ -0.88
GGA3-207ENST00000578896 CACNA1EQ15878 2313 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 NUP205Q92621 2012 aa9.55□□□□□ -0.88
GGA3-207ENST00000578896 CEP295Q9C0D2 2601 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 F8VP50 259 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CUTAO60888 179 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 PPP6R2O75170 966 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 RPP40O75818 363 aaKnown RBP9.54□□□□□ -0.88
GGA3-207ENST00000578896 CCDC192P0DO97 292 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CNR2P34972 360 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 MAGEA11P43364 429 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 RAP1GAPP47736 663 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CDH8P55286 799 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 MYL6P60660 151 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CYP24A1Q07973 514 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 USP4Q13107 963 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CUL4BQ13620 913 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 PKP1Q13835 747 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 KCNB1Q14721 858 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 PDGFRLQ15198 375 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 SURF1Q15526 300 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CSRP2Q16527 193 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 WDR72Q3MJ13 1102 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 C4orf50Q6ZRC1 276 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 WDR49Q8IV35 697 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 SFTPA1Q8IWL2 248 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CPA6Q8N4T0 437 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 IQUBQ8NA54 791 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 GAB3Q8WWW8 586 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 CD101Q93033 1021 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 FUBP3Q96I24 572 aaKnown RBP eCLIP9.54□□□□□ -0.88
GGA3-207ENST00000578896 ZNF396Q96N95 335 aaPredicted RBP9.54□□□□□ -0.88
GGA3-207ENST00000578896 FNBP1Q96RU3 617 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 C7orf25Q9BPX7 421 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 RTKNQ9BST9 563 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 ZNF518BQ9C0D4 1074 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 SNX25Q9H3E2 840 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 ZDHHC4Q9NPG8 344 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 NXF1Q9UBU9 619 aaKnown RBP9.54□□□□□ -0.88
GGA3-207ENST00000578896 ZMYM5Q9UJ78 669 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 PCDHA7Q9UN72 937 aa9.54□□□□□ -0.88
GGA3-207ENST00000578896 ASCC3Q8N3C0 2202 aaKnown RBP9.54□□□□□ -0.88
GGA3-207ENST00000578896 ZNF840PA6NDX5 716 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 A8MXQ7 604 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 LEFTY2O00292 366 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 SLC30A4O14863 429 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 KIAA0391O15091 583 aaKnown RBP9.53□□□□□ -0.88
GGA3-207ENST00000578896 EIF3DO15371 548 aaKnown RBP eCLIP9.53□□□□□ -0.88
GGA3-207ENST00000578896 CLSTN1O94985 981 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 PTPN1P18031 435 aaKnown RBP9.53□□□□□ -0.88
GGA3-207ENST00000578896 DRD1P21728 446 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 ANXA13P27216 316 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 HOXA6P31267 233 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 SLC6A11P48066 632 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 AMPD3Q01432 767 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 MESP2Q0VG99 397 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 TAF10Q12962 218 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 ORC1Q13415 861 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 PSMD6Q15008 389 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 C2orf27AQ580R0 203 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 PPM1JQ5JR12 505 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 TCEAL6Q6IPX3 200 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 SCARA5Q6ZMJ2 495 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 DENND5BQ6ZUT9 1274 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 UNC13DQ70J99 1090 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 DPH6Q7L8W6 267 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 CACNA2D4Q7Z3S7 1137 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 FILIP1Q7Z7B0 1213 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 TTC30AQ86WT1 665 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 CCDC33Q8N5R6 958 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 FSIP1Q8NA03 581 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 XXYLT1Q8NBI6 393 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 MYCBPAPQ8TBZ2 947 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 SPATA18Q8TC71 538 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 NETO1Q8TDF5 533 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 TCEAL3Q969E4 200 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 SPATA17Q96L03 361 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 CGRRF1Q99675 332 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 B3GNT5Q9BYG0 378 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 TPSD1Q9BZJ3 242 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 LRRC27Q9C0I9 530 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 SMYD3Q9H7B4 428 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.883e-10■■■■■ 37.2
GGA3-207ENST00000578896 TRPM5Q9NZQ8 1165 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 CHORDC1Q9UHD1 332 aaPredicted RBP9.53□□□□□ -0.88
GGA3-207ENST00000578896 SERTAD1Q9UHV2 236 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 ARHGAP26Q9UNA1 814 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 CPQQ9Y646 472 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 KIAA1549LQ6ZVL6 1849 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 KNL1Q8NG31 2342 aa9.53□□□□□ -0.88
GGA3-207ENST00000578896 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
GGA3-207ENST00000578896 EXOC3O60645 756 aa9.52□□□□□ -0.89
GGA3-207ENST00000578896 ATG13O75143 517 aa9.52□□□□□ -0.89
GGA3-207ENST00000578896 PHACTR2O75167 634 aa9.52□□□□□ -0.89
GGA3-207ENST00000578896 YEATS4O95619 227 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms