RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 KRT15P19012 456 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 FOXN2P32314 431 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 WDR4P57081 412 aaKnown RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 ATP11AP98196 1134 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 SNAPC2Q13487 334 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 HIF1AQ16665 826 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 CMASQ8NFW8 434 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 RXFP2Q8WXD0 754 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 SLC10A4Q96EP9 437 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 WDR83Q9BRX9 315 aaKnown RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 FOXP3Q9BZS1 431 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 NSRP1Q9H0G5 558 aaKnown RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 NKIRAS1Q9NYS0 192 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 BARX2Q9UMQ3 279 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 MAGEB2O15479 319 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 SNAI1O95863 264 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 ATICP31939 592 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 GABRB2P47870 512 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 EIF3EP60228 445 aaKnown RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 TRPM8Q7Z2W7 1104 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 TRABD2AQ86V40 505 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 THOC1Q96FV9 657 aaKnown RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 FAM49BQ9NUQ9 324 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 GPATCH2LQ9NWQ4 482 aa18.4■□□□□ 0.54
ERBB2-205ENST00000578199 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-205ENST00000578199 CLUHO75153 1309 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 PDHXO00330 501 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 HCRTO43612 131 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 RASSF9O75901 435 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 HMGCRP04035 888 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 PFKMP08237 780 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 RBP3P10745 1247 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 PDGFRAP16234 1089 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 CDH6P55285 790 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 POU5F1BQ06416 359 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 TAZQ16635 292 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 PPP1R26Q5T8A7 1209 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-205ENST00000578199 CGB2Q6NT52 195 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 SCYL2Q6P3W7 929 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 FAM47EQ6ZV65 393 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 CYP4V2Q6ZWL3 525 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-205ENST00000578199 SPATA18Q8TC71 538 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 SPOCK2Q92563 424 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 ZMAT2Q96NC0 199 aaKnown RBP18.39■□□□□ 0.53
ERBB2-205ENST00000578199 MRPL45Q9BRJ2 306 aaKnown RBP18.39■□□□□ 0.53
ERBB2-205ENST00000578199 CDHR5Q9HBB8 845 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 SETD4Q9NVD3 440 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 SHOC2Q9UQ13 582 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 SCN1AP35498 2009 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 A0A1B0GUA9 196 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 TMEM63AO94886 807 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 RBP5P82980 135 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 GLRA4Q5JXX5 417 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 ARHGEF18Q6ZSZ5 1173 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 ACOT1Q86TX2 421 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 NAT8LQ8N9F0 302 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 TTC25Q96NG3 672 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 FAM49AQ9H0Q0 323 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-205ENST00000578199 CYP3A43Q9HB55 503 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 SNTG2Q9NY99 539 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.39■□□□□ 0.53
ERBB2-205ENST00000578199 USP15Q9Y4E8 981 aaPredicted RBP18.39■□□□□ 0.53
ERBB2-205ENST00000578199 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
ERBB2-205ENST00000578199 PLXNA1Q9UIW2 1896 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 OAS1P00973 400 aaKnown RBP18.38■□□□□ 0.53
ERBB2-205ENST00000578199 P4HA1P13674 534 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 ZNF143P52747 638 aaPredicted RBP18.38■□□□□ 0.53
ERBB2-205ENST00000578199 BASP1P80723 227 aaKnown RBP18.38■□□□□ 0.53
ERBB2-205ENST00000578199 GRIK4Q16099 956 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 GOLGA7BQ2TAP0 167 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 PMF1Q6P1K2 205 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 C1orf228Q6PIY5 440 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
ERBB2-205ENST00000578199 SCUBE3Q8IX30 993 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 PPIL6Q8IXY8 311 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 SHCBP1Q8NEM2 672 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 PYROXD1Q8WU10 500 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 TRABDQ9H4I3 376 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 VRTNQ9H8Y1 702 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 ASNSD1Q9NWL6 643 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 GRID1Q9ULK0 1009 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 EFR3BQ9Y2G0 817 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 SNX9Q9Y5X1 595 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 CEP350Q5VT06 3117 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 CITO14578 2027 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 FAM47DPA6NHR8 397 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 ADCY6O43306 1168 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 NPTXRO95502 500 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 SMPD1P17405 629 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 GPD1P21695 349 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 TTC13Q8NBP0 860 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 B3GNT5Q9BYG0 378 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 KLC4Q9NSK0 619 aa18.38■□□□□ 0.53
ERBB2-205ENST00000578199 XPO7Q9UIA9 1087 aaKnown RBP18.38■□□□□ 0.53
ERBB2-205ENST00000578199 C2CD4BA6NLJ0 364 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 APOC4-APOC2K7ER74 178 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 APOC2P02655 101 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 RPA3P35244 121 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms