RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 LCP1P13796 627 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 IDEP14735 1019 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 VCAM1P19320 739 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 HOXA13P31271 388 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 HOXC12P31275 282 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 CASP14P31944 242 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 MTIF2P46199 727 aaKnown RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 FXR1P51114 621 aaKnown RBP eCLIP5.31□□□□□ -1.56
IFT20-205ENST00000578009 ADKP55263 362 aaKnown RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 ZBED6P86452 979 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 GIT2Q14161 759 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 MYBPC2Q14324 1141 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 COG2Q14746 738 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 SMAD2Q15796 467 aaKnown RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 MEA1Q16626 185 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 NFIL3Q16649 462 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 MAN2A1Q16706 1144 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 PRSS53Q2L4Q9 553 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 LSM12Q3MHD2 195 aaKnown RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 HSP90AA4PQ58FG1 418 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 HERC4Q5GLZ8 1057 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 LRCH2Q5VUJ6 765 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 NCAPH2Q6IBW4 605 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 CCDC174Q6PII3 467 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 TRIM65Q6PJ69 517 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 LRRC55Q6ZSA7 311 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 EPM2AIP1Q7L775 607 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 MTERF4Q7Z6M4 381 aaKnown RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 PPIL6Q8IXY8 311 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 CCDC170Q8IYT3 715 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 ZNF397Q8NF99 534 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 TMEM174Q8WUU8 243 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 SYN2Q92777 582 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 GPRASP2Q96D09 838 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 SHDQ96IW2 340 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 CNOT6LQ96LI5 555 aaKnown RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 MAP7D2Q96T17 732 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 TIPINQ9BVW5 301 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 TEKT3Q9BXF9 490 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 GLIS2Q9BZE0 524 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 TTYH3Q9C0H2 523 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 KCTD10Q9H3F6 313 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 NDST4Q9H3R1 872 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 SMOC1Q9H4F8 434 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 SPON1Q9HCB6 807 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 MYO1AQ9UBC5 1043 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 PPP1R1BQ9UD71 204 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 FAM184BQ9ULE4 1060 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 ODF2LQ9ULJ1 636 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 TRAF3IP3Q9Y228 551 aa5.31□□□□□ -1.56
IFT20-205ENST00000578009 CTDP1Q9Y5B0 961 aaPredicted RBP5.31□□□□□ -1.56
IFT20-205ENST00000578009 UBE4BO95155 1302 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ZNF541Q9H0D2 1346 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 TTC26A0AVF1 554 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 TRIM49BA6NDI0 452 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 CETN3O15182 167 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 NARSO43776 548 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 MAFKO60675 156 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 DKC1O60832 514 aaKnown RBP eCLIP5.3□□□□□ -1.56
IFT20-205ENST00000578009 FLOT1O75955 427 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 SSBP05455 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
IFT20-205ENST00000578009 KRT18P05783 430 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 ZNF16P17020 682 aaPredicted RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 COMTP21964 271 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 SFNP31947 248 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 CSF2RBP32927 897 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 KRT9P35527 623 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 LTBRP36941 435 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 STAT3P40763 770 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 GLRBP48167 497 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 JAK3P52333 1124 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ZNF131P52739 623 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 SNRPFP62306 86 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 PSMC6P62333 389 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 TUBB4BP68371 445 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 DGCR2P98153 550 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 SPP2Q13103 211 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ALCAMQ13740 583 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 KNOP1Q1ED39 458 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 AGBL4Q5VU57 503 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 RINT1Q6NUQ1 792 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 CATSPERGQ6ZRH7 1159 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 STXBP4Q6ZWJ1 553 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 C1orf186Q6ZWK4 172 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 REPS2Q8NFH8 660 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 CYP2W1Q8TAV3 490 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 GOLGA5Q8TBA6 731 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 PHOSPHO1Q8TCT1 267 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 SCFD1Q8WVM8 642 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 SENP7Q9BQF6 1050 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ZNF577Q9BSK1 485 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 TANGO6Q9C0B7 1094 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 RPAP3Q9H6T3 665 aaPredicted RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 ZSWIM4Q9H7M6 989 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 METTL14Q9HCE5 456 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 DLL4Q9NR61 685 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ADARB2Q9NS39 739 aaKnown RBP5.3□□□□□ -1.56
IFT20-205ENST00000578009 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ABHD10Q9NUJ1 306 aa5.3□□□□□ -1.56
IFT20-205ENST00000578009 ZNHIT6Q9NWK9 470 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms