RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 USP4Q13107 963 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 BIRC3Q13489 604 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 RSPO4Q2I0M5 234 aaPredicted RBP15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 LAIR1Q6GTX8 287 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 FSTL4Q6MZW2 842 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 SH3RF2Q8TEC5 729 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 OSCP1Q8WVF1 389 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 ATP2A3Q93084 1043 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 EXOC4Q96A65 974 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 PAGE5Q96GU1 130 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 ECT2Q9H8V3 914 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 EHD2Q9NZN4 543 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 TRPM5Q9NZQ8 1165 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 GCNT4Q9P109 453 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 NME7Q9Y5B8 376 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 WNT6Q9Y6F9 365 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 MYO18AQ92614 2054 aaKnown RBP15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 A0A1B0GVL5 298 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 F8VP50 259 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 HRO43593 1189 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 ACTN4O43707 911 aaKnown RBP15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 ATG13O75143 517 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 STAU1O95793 577 aaKnown RBP15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 GJA4P35212 333 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 GALK1P51570 392 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 USP46P62068 366 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 STK4Q13043 487 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 PSMD2Q13200 908 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 SRSF5Q13243 272 aaKnown RBP15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 KMT5BQ4FZB7 885 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 CHFRQ96EP1 664 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 P2RY13Q9BPV8 354 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 GZF1Q9H116 711 aaPredicted RBP15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 DPEP3Q9H4B8 488 aa15.92■□□□□ 0.14
RN7SL560P-201ENST00000577943 ABL1P00519 1130 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 EGFP01133 1207 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 PFKFB1P16118 471 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 PFKLP17858 780 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 DRD1P21728 446 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 CMA1P23946 247 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 HOXA6P31267 233 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 PPP3CCP48454 512 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 AP3M2P53677 418 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 SPEM2Q0P670 501 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 IFRD2Q12894 506 aaPredicted RBP15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 NR1H3Q13133 447 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 ZNF699Q32M78 642 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 TDRD10Q5VZ19 366 aaKnown RBP15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 PKN3Q6P5Z2 889 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 CEP68Q76N32 757 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 WDR5BQ86VZ2 330 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 B3GALNT2Q8NCR0 500 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 KIAA0895Q8NCT3 520 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 PLEKHO2Q8TD55 490 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 PARD3BQ8TEW8 1205 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 C8orf48Q96LL4 319 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 TTLL2Q9BWV7 592 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 ELOVL4Q9GZR5 314 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 XYLT2Q9H1B5 865 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 FBRSL1Q9HCM7 1045 aaKnown RBP15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 DLL3Q9NYJ7 618 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 USP25Q9UHP3 1055 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 ARHGAP26Q9UNA1 814 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 SLC8A2Q9UPR5 921 aa15.91■□□□□ 0.14
RN7SL560P-201ENST00000577943 LRRIQ3A6PVS8 624 aaPredicted RBP15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 PRR5-ARHGAP8B1AHC4 643 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 CLDN5O00501 218 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 RNF40O75150 1001 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 RETP07949 1114 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 TCF3P15923 654 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 SDHBP21912 280 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 TGM1P22735 817 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 HOXC13P31276 330 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 NOP14P78316 857 aaKnown RBP15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 KRT85P78386 507 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 ARHGAP8P85298 464 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 LMNB2Q03252 620 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 EML3Q32P44 896 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 FBXO43Q4G163 708 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 ZNF667Q5HYK9 610 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 NAIF1Q69YI7 327 aaPredicted RBP15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 CD101Q93033 1021 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 ZNF518BQ9C0D4 1074 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 LINC00597Q9H2U6 94 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 SMYD3Q9H7B4 428 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 VRTNQ9H8Y1 702 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 PARD6AQ9NPB6 346 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 DMAC2Q9NW81 257 aa15.9■□□□□ 0.14
RN7SL560P-201ENST00000577943 ZNF840PA6NDX5 716 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 LEFTY2O00292 366 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 NFATC1O95644 943 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 C4BPAP04003 597 aaKnown RBP15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 MYL1P05976 194 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 PXNP49023 591 aaPredicted RBP15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 CACNA2D1P54289 1103 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 CDH8P55286 799 aa15.89■□□□□ 0.13
RN7SL560P-201ENST00000577943 TAF10Q12962 218 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms