RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ATF7IP2Q5U623 682 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 ACOT1Q86TX2 421 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 ECHDC2Q86YB7 292 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 RXFP2Q8WXD0 754 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 THAP11Q96EK4 314 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 KREMEN1Q96MU8 473 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 SLC24A2Q9UI40 661 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 GGA2Q9UJY4 613 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 CRADDP78560 199 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 ITGA9Q13797 1035 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 PTK6Q13882 451 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 CYP39A1Q9NYL5 469 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 MCM8Q9UJA3 840 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 TMX2Q9Y320 296 aa18.59■□□□□ 0.57
ATPAF1-214ENST00000576409 RARBP10826 455 aa18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 PEX5P50542 639 aa18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 FAM71AQ8IYT1 594 aa18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 SEPT1Q8WYJ6 367 aa18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 DCPSQ96C86 337 aaKnown RBP18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 HPDLQ96IR7 371 aa18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 LRCH1Q9Y2L9 728 aa18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 ANGPTL3Q9Y5C1 460 aa18.58■□□□□ 0.57
ATPAF1-214ENST00000576409 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 OXNAD1Q96HP4 312 aaPredicted RBP18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 FAM167AQ96KS9 214 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 CCT7Q99832 543 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 PCDH9Q9HC56 1237 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 AGO4Q9HCK5 861 aaKnown RBP18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 IPO11Q9UI26 975 aaKnown RBP18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 FZD1Q9UP38 647 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 CACNA1FO60840 1977 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 COL5A2P05997 1499 aaPredicted RBP18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 MYH8P13535 1937 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 GOLGA8TH3BQL2 631 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 PSMD10O75832 226 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 ETS2P15036 469 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 TFE3P19532 575 aaPredicted RBP18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 ANO4Q32M45 955 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 TMC2Q8TDI7 906 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 MECRQ9BV79 373 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 STAP1Q9ULZ2 295 aa18.58■□□□□ 0.56
ATPAF1-214ENST00000576409 GSTA4O15217 222 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 NME5P56597 212 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 SLC25A3Q00325 362 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 PLIN5Q00G26 463 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 GRAMD4Q6IC98 578 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 RTKN2Q8IZC4 609 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 DRC3Q9H069 523 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 AFF2P51816 1311 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 AVILO75366 819 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 NPTXRO95502 500 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 PROCP04070 461 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 ITGB5P18084 799 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 CAP2P40123 477 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 PCSK7Q16549 785 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 NPNTQ6UXI9 565 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 OTOAQ7RTW8 1153 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 SHC3Q92529 594 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 GJD4Q96KN9 370 aaPredicted RBP18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 NT5C1AQ9BXI3 368 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 C2orf40Q9H1Z8 148 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 FAM96AQ9H5X1 160 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 SPATA31A5Q5VU36 1347 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 SPATA31A7Q8IWB4 1347 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 USP12O75317 370 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 CSPG5O95196 566 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 OATP04181 439 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 SULT1E1P49888 294 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 NFIL3Q16649 462 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 HACE1Q8IYU2 909 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 RASGEF1CQ8N431 466 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 RNF139Q8WU17 664 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 LRRC19Q9H756 370 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 SLC17A7Q9P2U7 560 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 SHOC2Q9UQ13 582 aa18.57■□□□□ 0.56
ATPAF1-214ENST00000576409 UBA6A0AVT1 1052 aaPredicted RBP18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 DCXO43602 365 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 E2F6O75461 281 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 TAC1P20366 129 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 ATP4AP20648 1035 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 DGKZQ13574 1117 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 TMEM132DQ14C87 1099 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 SLC1A5Q15758 541 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 ZCCHC9Q8N567 271 aaKnown RBP18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 FAM13CQ8NE31 585 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 RASSF9O75901 435 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 KPNA2P52292 529 aaKnown RBP18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 CYP4X1Q8N118 509 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 FAM172AQ8WUF8 416 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 PIK3R5Q8WYR1 880 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 CYP4F12Q9HCS2 524 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 PDP2Q9P2J9 529 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 SNUPNO95149 360 aaKnown RBP18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 GOLGA7BQ2TAP0 167 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 EFCAB12Q6NXP0 572 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 CRELD2Q6UXH1 353 aaPredicted RBP18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 PPCSQ9HAB8 311 aa18.56■□□□□ 0.56
ATPAF1-214ENST00000576409 POLIQ9UNA4 740 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms