RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 HOXC13P31276 330 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 PXNP49023 591 aaPredicted RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 CSRP3P50461 194 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 NEK4P51957 841 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 YARSP54577 528 aaKnown RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 ETF1P62495 437 aaKnown RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 CDC42EP1Q00587 391 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 DSC1Q08554 894 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SLC5A9Q2M3M2 681 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 FAM78AQ5JUQ0 283 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SYCP2LQ5T4T6 812 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 FAM160B1Q5W0V3 765 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 PMS2CLQ68D20 193 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SLC6A19Q695T7 634 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 NXNQ6DKJ4 435 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 TWF2Q6IBS0 349 aaKnown RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 VITQ6UXI7 678 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 MFSD6Q6ZSS7 791 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 FGD2Q7Z6J4 655 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 IQCA1Q86XH1 822 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SPATS2Q86XZ4 545 aaKnown RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 PASD1Q8IV76 773 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 MFSD6LQ8IWD5 586 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 TCEAL8Q8IYN2 117 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 FAM9BQ8IZU0 186 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 CSGALNACT1Q8TDX6 532 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 ING5Q8WYH8 240 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 MCRS1Q96EZ8 462 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 WBP1Q96G27 269 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 MRGPRX3Q96LB0 322 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SMAD5Q99717 465 aaKnown RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SDF4Q9BRK5 362 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 YIPF4Q9BSR8 244 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 LGR4Q9BXB1 951 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 ZNF700Q9H0M5 742 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 RNF41Q9H4P4 317 aaPredicted RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 RIOX1Q9H6W3 641 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 RSAD1Q9HA92 442 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 TRPV4Q9HBA0 871 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 HCFC1R1Q9NWW0 138 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 EBF1Q9UH73 591 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 NDOR1Q9UHB4 597 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SLC8A2Q9UPR5 921 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 AKT3Q9Y243 479 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 HIF3AQ9Y2N7 669 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 ANK1P16157 1881 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 SPTAN1Q13813 2472 aaKnown RBP5.72□□□□□ -1.49
TRIM25-208ENST00000574234 MYLKQ15746 1914 aa5.72□□□□□ -1.49
TRIM25-208ENST00000574234 TRIP11Q15643 1979 aa5.71□□□□□ -1.49
TRIM25-208ENST00000574234 OBSL1O75147 1896 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 B8ZZF3 427 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 SPECC1L-ADORA2AF8WAN1 911 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 MEIS2O14770 477 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 CHADO15335 359 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 TBX1O43435 398 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 FGAP02671 866 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 RHOP08100 348 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 BMP4P12644 408 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 ENGP17813 658 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 SFPQP23246 707 aaKnown RBP eCLIP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 DPP6P42658 865 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 OR1G1P47890 313 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 FAM193AP78312 1265 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 GABREP78334 506 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 HNRNPUQ00839 825 aaKnown RBP eCLIP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 FCHO2Q0JRZ9 810 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 ZNF460Q14592 562 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 C4orf46Q504U0 113 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 PRSS36Q5K4E3 855 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 VPS53Q5VIR6 699 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 EFCAB12Q6NXP0 572 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 FUT10Q6P4F1 479 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 SLC23A3Q6PIS1 610 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 TXNDC11Q6PKC3 985 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 PCSK4Q6UW60 755 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 ABHD15Q6UXT9 468 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 APBB1IPQ7Z5R6 666 aaPredicted RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 MRPL10Q7Z7H8 261 aaKnown RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 CCDC60Q8IWA6 550 aaPredicted RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 ITPRIPQ8IWB1 547 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 MRPL41Q8IXM3 137 aaKnown RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 FTSJ3Q8IY81 847 aaKnown RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 HDDC3Q8N4P3 179 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 IL22RA1Q8N6P7 574 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 ENAHQ8N8S7 591 aaPredicted RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 FAM181AQ8N9Y4 354 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 SMARCD2Q92925 531 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 CUL5Q93034 780 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 E2F7Q96AV8 911 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 FCRL3Q96P31 734 aaPredicted RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 CLSTN3Q9BQT9 956 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 COLEC11Q9BWP8 271 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 NUSAP1Q9BXS6 441 aaKnown RBP5.71□□□□□ -1.5
TRIM25-208ENST00000574234 UBN1Q9NPG3 1134 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 ZNF302Q9NR11 478 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 AASDHPPTQ9NRN7 309 aa5.71□□□□□ -1.5
TRIM25-208ENST00000574234 KCNH7Q9NS40 1196 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms