RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 LPAL2Q16609 132 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 EML3Q32P44 896 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 MDH1BQ5I0G3 518 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 TDRD10Q5VZ19 366 aaKnown RBP12.11□□□□□ -0.47
LITAF-206ENST00000571277 DENND5BQ6ZUT9 1274 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 LONP2Q86WA8 852 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 SLC9A9Q8IVB4 645 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 EZH1Q92800 747 aaPredicted RBP12.11□□□□□ -0.47
LITAF-206ENST00000571277 C8orf48Q96LL4 319 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 SNX25Q9H3E2 840 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 DPEP3Q9H4B8 488 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 ECT2Q9H8V3 914 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 ARHGAP26Q9UNA1 814 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 WNT6Q9Y6F9 365 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 SPTBN2O15020 2390 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 EML5Q05BV3 1969 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 A0A1B0GVL5 298 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 ZNF840PA6NDX5 716 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
LITAF-206ENST00000571277 EXOC3O60645 756 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 OLFM2O95897 454 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 EGFP01133 1207 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 C4BPAP04003 597 aaKnown RBP12.1□□□□□ -0.47
LITAF-206ENST00000571277 HDCP19113 662 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 GJA4P35212 333 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 GRIK1P39086 918 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 TNNC1P63316 161 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 GRSF1Q12849 480 aaKnown RBP eCLIP12.1□□□□□ -0.47
LITAF-206ENST00000571277 PUM1Q14671 1186 aaKnown RBP eCLIP12.1□□□□□ -0.47
LITAF-206ENST00000571277 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 HEATR6Q6AI08 1181 aaKnown RBP12.1□□□□□ -0.47
LITAF-206ENST00000571277 LAIR1Q6GTX8 287 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 CC2D1AQ6P1N0 951 aaPredicted RBP12.1□□□□□ -0.47
LITAF-206ENST00000571277 GPR161Q8N6U8 529 aaKnown RBP12.1□□□□□ -0.47
LITAF-206ENST00000571277 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 B3GALNT2Q8NCR0 500 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 OR6B3Q8NGW1 331 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 GOLGA5Q8TBA6 731 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 SH3RF2Q8TEC5 729 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 ELMO3Q96BJ8 720 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 B3GNT5Q9BYG0 378 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 ZNF518BQ9C0D4 1074 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 RNF38Q9H0F5 515 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 LINC00597Q9H2U6 94 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 SMYD3Q9H7B4 428 aa12.1□□□□□ -0.47
LITAF-206ENST00000571277 DUS2Q9NX74 493 aaKnown RBP12.1□□□□□ -0.47
LITAF-206ENST00000571277 NXF1Q9UBU9 619 aaKnown RBP12.1□□□□□ -0.47
LITAF-206ENST00000571277 SPAG17Q6Q759 2223 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 FAM237AA0A1B0GTK4 181 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 A8MXQ7 604 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 CLDN5O00501 218 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 PDXKO00764 312 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 TRIM66O15016 1216 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 PFKLP17858 780 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 CNR2P34972 360 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 GALK1P51570 392 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 CDH8P55286 799 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 DLG4P78352 724 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 PSMD2Q13200 908 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 TRPC3Q13507 836 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 KCNB1Q14721 858 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 RSPO4Q2I0M5 234 aaPredicted RBP12.09□□□□□ -0.47
LITAF-206ENST00000571277 GAB4Q2WGN9 574 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 C1orf220Q5T0J3 134 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 PAQR9Q6ZVX9 377 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 CPA6Q8N4T0 437 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 SECISBP2LQ93073 1101 aaKnown RBP12.09□□□□□ -0.47
LITAF-206ENST00000571277 ATP2A3Q93084 1043 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 SYAP1Q96A49 352 aaPredicted RBP12.09□□□□□ -0.47
LITAF-206ENST00000571277 P2RY13Q9BPV8 354 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 ELOVL4Q9GZR5 314 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 SDCBP2Q9H190 292 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 EXOC1Q9NV70 894 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 POLR3BQ9NW08 1133 aaPredicted RBP12.09□□□□□ -0.47
LITAF-206ENST00000571277 TRPM5Q9NZQ8 1165 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 USP25Q9UHP3 1055 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 GMEB2Q9UKD1 530 aa12.09□□□□□ -0.47
LITAF-206ENST00000571277 CCDC163A0A0D9SF12 145 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 MED19A0JLT2 244 aaPredicted RBP12.08□□□□□ -0.48
LITAF-206ENST00000571277 RNF40O75150 1001 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 PHACTR2O75167 634 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 OAS1P00973 400 aaKnown RBP12.08□□□□□ -0.48
LITAF-206ENST00000571277 MYL1P05976 194 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 RETP07949 1114 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 DRD1P21728 446 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 ANXA13P27216 316 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 RAP1GAPP47736 663 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 AP3M2P53677 418 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 SLC7A9P82251 487 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 AMPD2Q01433 879 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 SPEM2Q0P670 501 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 TAF10Q12962 218 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 NCOA4Q13772 614 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 SIM2Q14190 667 aaPredicted RBP12.08□□□□□ -0.48
LITAF-206ENST00000571277 ZNF699Q32M78 642 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 ZACNQ401N2 412 aa12.08□□□□□ -0.48
LITAF-206ENST00000571277 PRR23BQ6ZRT6 265 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms