RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 K7ESF4 209 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 MYL4P12829 197 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 PRKCSHP14314 528 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-205ENST00000571028 GTF2H1P32780 548 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 VIPR2P41587 438 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 ZNF165P49910 485 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 TNNC1P63316 161 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 MYL7Q01449 175 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 ROR1Q01973 937 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 KCNH2Q12809 1159 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 LRMPQ12912 555 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 GAS6Q14393 721 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 Q6ZS52 159 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 CACNA2D4Q7Z3S7 1137 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 WDR5BQ86VZ2 330 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 METTL23Q86XA0 190 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 APPL2Q8NEU8 664 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 ZSCAN18Q8TBC5 510 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-205ENST00000571028 E2F7Q96AV8 911 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 ZNF512Q96ME7 567 aaPredicted RBP14.21□□□□□ -0.13
CCDC40-205ENST00000571028 ASAH2Q9NR71 780 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 TAB2Q9NYJ8 693 aa14.21□□□□□ -0.13
CCDC40-205ENST00000571028 SLC38A8A6NNN8 435 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 SMTNL1A8MU46 457 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 BECN2A8MW95 431 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 C1QTNF9BB2RNN3 333 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 H7C4K7 107 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 M0QZQ0 153 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 SYN3O14994 580 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 RPP40O75818 363 aaKnown RBP14.2□□□□□ -0.14
CCDC40-205ENST00000571028 AFPP02771 609 aaKnown RBP14.2□□□□□ -0.14
CCDC40-205ENST00000571028 C1QTNF9P0C862 333 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
CCDC40-205ENST00000571028 ATICP31939 592 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 FMO5P49326 533 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 AARSP49588 968 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC40-205ENST00000571028 MLLT6P55198 1093 aaPredicted RBP14.2□□□□□ -0.14
CCDC40-205ENST00000571028 YWHAHQ04917 246 aaPredicted RBP14.2□□□□□ -0.14
CCDC40-205ENST00000571028 SGSM1Q2NKQ1 1148 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 ZNF667Q5HYK9 610 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 RNF43Q68DV7 783 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 OVOS1Q6IE37 1185 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 MFSD6LQ8IWD5 586 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 TRIM59Q8IWR1 403 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 LEMD2Q8NC56 503 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 CCDC150Q8NCX0 1101 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 SEMA4DQ92854 862 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 LSM14BQ9BX40 385 aaKnown RBP14.2□□□□□ -0.14
CCDC40-205ENST00000571028 IMPG2Q9BZV3 1241 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 L1RE1Q9UN81 338 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 INSL5Q9Y5Q6 135 aa14.2□□□□□ -0.14
CCDC40-205ENST00000571028 CEP295Q9C0D2 2601 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 HEPACAM2A8MVW5 462 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 TM4SF5O14894 197 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 EPN2O95208 641 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 OR4Q2P0C623 313 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 HOXB3P14651 431 aaPredicted RBP14.19□□□□□ -0.14
CCDC40-205ENST00000571028 ATF2P15336 505 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 PAX3P23760 479 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 CCR2P41597 374 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 RAP1GAPP47736 663 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 NOVA1P51513 510 aaKnown RBP14.19□□□□□ -0.14
CCDC40-205ENST00000571028 ENPEPQ07075 957 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 FOXC1Q12948 553 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 SOWAHAQ2M3V2 549 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 WDR44Q5JSH3 913 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 SLC8B1Q6J4K2 584 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 ZNF280DQ6N043 979 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 POTEHQ6S545 545 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 TCEAL8Q8IYN2 117 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 ADGRF2Q8IZF7 708 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 THEM5Q8N1Q8 247 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 PDCL2Q8N4E4 241 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 FBXL13Q8NEE6 735 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 GAB3Q8WWW8 586 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 ZSWIM3Q96MP5 696 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 TUBGCP2Q9BSJ2 902 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 GPR88Q9GZN0 384 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 XYLT2Q9H1B5 865 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 TSPY26PQ9H489 355 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 CBX8Q9HC52 389 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 RXFP3Q9NSD7 469 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 RAB20Q9NX57 234 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 FBXL5Q9UKA1 691 aa14.19□□□□□ -0.14
CCDC40-205ENST00000571028 TMEM8BA6NDV4 472 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 SPECC1L-ADORA2AF8WAN1 911 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 HCRTO43612 131 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 ABLIM3O94929 683 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 PDGFRBP09619 1106 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 CPB1P15086 417 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 TYMPP19971 482 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 ACAT1P24752 427 aaKnown RBP14.18□□□□□ -0.14
CCDC40-205ENST00000571028 HOXA6P31267 233 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 MPLP40238 635 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 SOX9P48436 509 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 CDH8P55286 799 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 MARSP56192 900 aaKnown RBP14.18□□□□□ -0.14
CCDC40-205ENST00000571028 NOP14P78316 857 aaKnown RBP14.18□□□□□ -0.14
CCDC40-205ENST00000571028 CETN1Q12798 172 aa14.18□□□□□ -0.14
CCDC40-205ENST00000571028 NCAPHQ15003 741 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms