RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RNF139Q8WU17 664 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 FAM151AQ8WW52 585 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 NANOS1Q8WY41 292 aaKnown RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 BSNDQ8WZ55 320 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 RFFLQ8WZ73 363 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 ANKRD7Q92527 254 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 SLC10A4Q96EP9 437 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 MYO19Q96H55 970 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 FAXDC2Q96IV6 333 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 CABS1Q96KC9 395 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 PPP1R13BQ96KQ4 1090 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 ATP6V1G3Q96LB4 118 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 TEPSINQ96N21 525 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 ACAP3Q96P50 834 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 CATSPER2Q96P56 530 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 WDR24Q96S15 920 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 P2RX7Q99572 595 aaKnown RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 TXN2Q99757 166 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 SH3GL3Q99963 347 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 CITED2Q99967 270 aaPredicted RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 TBCDQ9BTW9 1192 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 CCDC106Q9BWC9 280 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 APOL5Q9BWW9 433 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 OSBPL10Q9BXB5 764 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 SPZ1Q9BXG8 430 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 LRRC3Q9BY71 257 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 ZCWPW1Q9H0M4 648 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 SMOC1Q9H4F8 434 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 RIOX1Q9H6W3 641 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 FANCEQ9HB96 536 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 ZNF287Q9HBT7 754 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 CBX8Q9HC52 389 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 TM9SF3Q9HD45 589 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 SEMA3GQ9NS98 782 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 HOMER3Q9NSC5 361 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 DDX19AQ9NUU7 478 aaKnown RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 BARHL2Q9NY43 387 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 TUBA8Q9NY65 449 aaPredicted RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 TMOD2Q9NZR1 351 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 UBA2Q9UBT2 640 aaPredicted RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 MTRF1LQ9UGC7 380 aaKnown RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 SERTAD1Q9UHV2 236 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 CNOT7Q9UIV1 285 aaKnown RBP3.76□□□□□ -1.81
SMG6-208ENST00000570874 CLEC4AQ9UMR7 237 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 PCDHA4Q9UN74 947 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 HPSEQ9Y251 543 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 SIK3Q9Y2K2 1263 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 MED16Q9Y2X0 877 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 SESN1Q9Y6P5 492 aa3.76□□□□□ -1.81
SMG6-208ENST00000570874 PASKQ96RG2 1323 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 LTBP3Q9NS15 1303 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TRBV23-1A0A0A0MS06 115 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 FAM237AA0A1B0GTK4 181 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 A0A1W2PPL8 197 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 VWA3AA6NCI4 1184 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 SMCO2A6NFE2 343 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 F5H6K3 240 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 K7EPI3 171 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 AGRPO00253 132 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 AP3D1O14617 1153 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 MAGEB3O15480 346 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 POLR2DO15514 142 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 CUTAO60888 179 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 KERAO60938 352 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 EFCAB14O75071 495 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 DDNO94850 711 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 RTN3O95197 1032 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 TDP2O95551 362 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 OLFM2O95897 454 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 F12P00748 615 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 ASLP04424 464 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 RPLP1P05386 114 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 CKMT1AP12532 417 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 PORP16435 677 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 IL10P22301 178 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 KCNA5P22460 613 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 JAK1P23458 1154 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CMA1P23946 247 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CHMP24386 653 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 HOXD13P35453 343 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 SYKP43405 635 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 VPS41P49754 854 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 GNAQP50148 359 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CDR1P51861 262 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 MAPK10P53779 464 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 HIRAP54198 1017 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 NR1H2P55055 460 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 GSCP56915 257 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 BASP1P80723 227 aaKnown RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 HTD2P86397 168 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ATP2C1P98194 919 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 MAP3K10Q02779 954 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 ACY1Q03154 408 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 KLRC3Q07444 240 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CETN1Q12798 172 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 TRPC3Q13507 836 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 CAMK2GQ13555 558 aaPredicted RBP3.75□□□□□ -1.81
SMG6-208ENST00000570874 SNX1Q13596 522 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 DPYSQ14117 519 aa3.75□□□□□ -1.81
SMG6-208ENST00000570874 IKBKEQ14164 716 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms