RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 NCOA4Q13772 614 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 CCINQ13939 588 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 SIM2Q14190 667 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 LPAL2Q16609 132 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 SGSM1Q2NKQ1 1148 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 SCARA5Q6ZMJ2 495 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 Q6ZS52 159 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 LONP2Q86WA8 852 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 SLC9A9Q8IVB4 645 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 B3GALNT2Q8NCR0 500 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 KIAA0895Q8NCT3 520 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 CCDC150Q8NCX0 1101 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 SH3RF2Q8TEC5 729 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 PARD3BQ8TEW8 1205 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 OSCP1Q8WVF1 389 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 NELL1Q92832 810 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 C8orf48Q96LL4 319 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 P2RY13Q9BPV8 354 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 ECT2Q9H8V3 914 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 HPS4Q9NQG7 708 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 WNT6Q9Y6F9 365 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 OBSL1O75147 1896 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 WDFY4Q6ZS81 3184 aa9.51□□□□□ -0.89
NPLOC4-204ENST00000570324 CLDN5O00501 218 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 TRDMT1O14717 391 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 SLC9A3R1O14745 358 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 NFATC1O95644 943 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 C4BPAP04003 597 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 PFKLP17858 780 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 RPL13P26373 211 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 YWHAQP27348 245 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 GJA4P35212 333 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 PIK3CAP42336 1068 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 RAP1GAPP47736 663 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 GALK1P51570 392 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 NDUFA8P51970 172 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 CDH8P55286 799 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 USP46P62068 366 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 NOP14P78316 857 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 TAF10Q12962 218 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 GAS6Q14393 721 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 BECN1Q14457 450 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 ZNF77Q15935 545 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 TMEM196Q5HYL7 178 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 ERMP1Q7Z2K6 904 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 NUP93Q8N1F7 819 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 PDZD8Q8NEN9 1154 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 CCDC26Q8TAB7 109 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 TMC2Q8TDI7 906 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 TAF4BQ92750 862 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 CD101Q93033 1021 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 SLC22A12Q96S37 553 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 ZNF518BQ9C0D4 1074 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 NACA2Q9H009 215 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 KCTD10Q9H3F6 313 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 DPEP3Q9H4B8 488 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 SMYD3Q9H7B4 428 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 GCNT4Q9P109 453 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 ARHGAP26Q9UNA1 814 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 HPSEQ9Y251 543 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 F5P12259 2224 aa9.5□□□□□ -0.89
NPLOC4-204ENST00000570324 FAM186AA6NE01 2351 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 IKBKBO14920 756 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 RNF40O75150 1001 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 PAPSS2O95340 614 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 EGFP01133 1207 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 MBL2P11226 248 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 TDGF1P13385 188 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 NR2F2P24468 414 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 VAMP7P51809 220 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 DLG4P78352 724 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 LMNB2Q03252 620 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 USP4Q13107 963 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 PUM1Q14671 1186 aaKnown RBP eCLIP9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 FBXO43Q4G163 708 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 FSTL4Q6MZW2 842 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 KRBA2Q6ZNG9 492 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 INTS8Q75QN2 995 aaKnown RBP9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 DGLUCYQ7Z3D6 616 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 ACOT1Q86TX2 421 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 DDX42Q86XP3 938 aaKnown RBP eCLIP9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 PLEKHO2Q8TD55 490 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 FBXO32Q969P5 355 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 CHFRQ96EP1 664 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 SMARCD1Q96GM5 515 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 CHAMP1Q96JM3 812 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 TTLL2Q9BWV7 592 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 B3GNT5Q9BYG0 378 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 XYLT2Q9H1B5 865 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 MMRN2Q9H8L6 949 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 VRTNQ9H8Y1 702 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 DMAP1Q9NPF5 467 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 DMAC2Q9NW81 257 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 SMPD4Q9NXE4 827 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 MAPK8IP1Q9UQF2 711 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 CPQQ9Y646 472 aa9.49□□□□□ -0.89
NPLOC4-204ENST00000570324 A0A1W2PQ27 194 aa9.48□□□□□ -0.89
NPLOC4-204ENST00000570324 A0A1W2PQ64 194 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms