RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TCEAL8Q8IYN2 117 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 ATAD1Q8NBU5 361 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 OR8K1Q8NGG5 319 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 SUSD6Q92537 303 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 SMARCD1Q96GM5 515 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 PHF7Q9BWX1 381 aaPredicted RBP16.98■□□□□ 0.31
USB1-215ENST00000569252 B3GNT5Q9BYG0 378 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 KCNH6Q9H252 994 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 MAN1C1Q9NR34 630 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 TMLHEQ9NVH6 421 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 DZANK1Q9NVP4 752 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 HCFC2Q9Y5Z7 792 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 BZW2Q9Y6E2 419 aaKnown RBP16.98■□□□□ 0.31
USB1-215ENST00000569252 PLXNA3P51805 1871 aa16.98■□□□□ 0.31
USB1-215ENST00000569252 LRRC53A6NM62 1247 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 H0Y858 1186 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 AP1G2O75843 785 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 CCDC130P13994 396 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 CYP11B1P15538 503 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 CYP2F1P24903 491 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 CDC25BP30305 580 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 CLCN1P35523 988 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 CDR1P51861 262 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 EPHB3P54753 998 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 PTPN5P54829 565 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 VEPH1Q14D04 833 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 SYCE2Q6PIF2 218 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 BMP8AQ7Z5Y6 402 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 SLC47A2Q86VL8 602 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 ZNF677Q86XU0 584 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 SLC22A17Q8WUG5 538 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 ZNF606Q8WXB4 792 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 SYN2Q92777 582 aaPredicted RBP16.97■□□□□ 0.31
USB1-215ENST00000569252 LPIN3Q9BQK8 851 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 GPR88Q9GZN0 384 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 EHD2Q9NZN4 543 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 AIPL1Q9NZN9 384 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 IMPACTQ9P2X3 320 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 NME7Q9Y5B8 376 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 VPS13AQ96RL7 3174 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 MYO10Q9HD67 2058 aa16.97■□□□□ 0.31
USB1-215ENST00000569252 CLDN5O00501 218 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 GYPCP04921 128 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 C8AP07357 584 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 PNMA6AP0CW24 399 aaPredicted RBP16.96■□□□□ 0.31
USB1-215ENST00000569252 HAPLN1P10915 354 aaPredicted RBP16.96■□□□□ 0.31
USB1-215ENST00000569252 EPCAMP16422 314 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 BRD2P25440 801 aaKnown RBP16.96■□□□□ 0.31
USB1-215ENST00000569252 MAGEA11P43364 429 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 SNX16P57768 344 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 GOLGA7BQ2TAP0 167 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 LCLAT1Q6UWP7 414 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 ITIH5Q86UX2 942 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 VPS36Q86VN1 386 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 FUKQ8N0W3 1084 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 ANKRD52Q8NB46 1076 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 SLC7A14Q8TBB6 771 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 BAP1Q92560 729 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 ZNF512Q96ME7 567 aaPredicted RBP16.96■□□□□ 0.31
USB1-215ENST00000569252 NOX5Q96PH1 765 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 PKMYT1Q99640 499 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 DUSP16Q9BY84 665 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 TTYH3Q9C0H2 523 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 S1PR5Q9H228 398 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 PIDD1Q9HB75 910 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
USB1-215ENST00000569252 FBXW11Q9UKB1 542 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 TSPAN16Q9UKR8 245 aa16.96■□□□□ 0.31
USB1-215ENST00000569252 VWA8A3KMH1 1905 aa16.96■□□□□ 0.3
USB1-215ENST00000569252 PTPRZ1P23471 2315 aaPredicted RBP16.95■□□□□ 0.3
USB1-215ENST00000569252 M0QYV0 167 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 GFRA3O60609 400 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 XYLBO75191 536 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 HOXB8P17481 243 aaPredicted RBP16.95■□□□□ 0.3
USB1-215ENST00000569252 TNFAIP3P21580 790 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 BCAT1P54687 386 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 SIGLEC14Q08ET2 396 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 KLHL30Q0D2K2 578 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 TWF1Q12792 350 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 FAM35AQ86V20 835 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 SPC24Q8NBT2 197 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 CEP295NLQ96MC4 621 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 ZNF518BQ9C0D4 1074 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 DMAP1Q9NPF5 467 aaPredicted RBP16.95■□□□□ 0.3
USB1-215ENST00000569252 KRT82Q9NSB4 513 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 ZDHHC7Q9NXF8 308 aa16.95■□□□□ 0.3
USB1-215ENST00000569252 O00370 1275 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 MICAL2O94851 1124 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 SEC24AO95486 1093 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 SERPING1P05155 500 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 HNRNPA1P09651 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
USB1-215ENST00000569252 SETSIPP0DME0 302 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 NPR3P17342 541 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 AVPR2P30518 371 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 ADKP55263 362 aaKnown RBP16.94■□□□□ 0.3
USB1-215ENST00000569252 MAP3K7CLP57077 242 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 KCNC3Q14003 757 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 TAF3Q5VWG9 929 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 CES5AQ6NT32 575 aa16.94■□□□□ 0.3
USB1-215ENST00000569252 ANKRD54Q6NXT1 300 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms