RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 PKN3Q6P5Z2 889 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 CPA6Q8N4T0 437 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 SH3RF2Q8TEC5 729 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 CHAMP1Q96JM3 812 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 ECT2Q9H8V3 914 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 FBRSL1Q9HCM7 1045 aaKnown RBP20.16■□□□□ 0.82
SPSB3-210ENST00000568416 TMEM30AQ9NV96 361 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 DUS2Q9NX74 493 aaKnown RBP20.16■□□□□ 0.82
SPSB3-210ENST00000568416 DLL3Q9NYJ7 618 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 EHD2Q9NZN4 543 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 TRPM5Q9NZQ8 1165 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 ARHGAP26Q9UNA1 814 aa20.16■□□□□ 0.82
SPSB3-210ENST00000568416 FAM237AA0A1B0GTK4 181 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 PDXKO00764 312 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 HRO43593 1189 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 PHACTR2O75167 634 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 MYL1P05976 194 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 CNR2P34972 360 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 IFNAR2P48551 515 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 PDE6CP51160 858 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 GALK1P51570 392 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 KRT85P78386 507 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 BIRC3Q13489 604 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 LAIR1Q6GTX8 287 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 B3GALNT2Q8NCR0 500 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 SPATA32Q96LK8 384 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 B3GNT5Q9BYG0 378 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 ZNF518BQ9C0D4 1074 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 ELOVL4Q9GZR5 314 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 SMYD3Q9H7B4 428 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 GMEB2Q9UKD1 530 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 RAB23Q9ULC3 237 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 WNT6Q9Y6F9 365 aa20.15■□□□□ 0.82
SPSB3-210ENST00000568416 PTPRZ1P23471 2315 aaPredicted RBP20.15■□□□□ 0.82
SPSB3-210ENST00000568416 F5P12259 2224 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 ZNF840PA6NDX5 716 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 VNN1O95497 513 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 EGFP01133 1207 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 DRD1P21728 446 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 PPP3CCP48454 512 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 ZXDBP98169 803 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 SRSF5Q13243 272 aaKnown RBP20.14■□□□□ 0.81
SPSB3-210ENST00000568416 NCOA4Q13772 614 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 SIM2Q14190 667 aaPredicted RBP20.14■□□□□ 0.81
SPSB3-210ENST00000568416 PUM1Q14671 1186 aaKnown RBP eCLIP20.14■□□□□ 0.81
SPSB3-210ENST00000568416 LPAL2Q16609 132 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 ZNF699Q32M78 642 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 EML3Q32P44 896 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 NAIF1Q69YI7 327 aaPredicted RBP20.14■□□□□ 0.81
SPSB3-210ENST00000568416 WDR5BQ86VZ2 330 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 ATP2A3Q93084 1043 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 P2RY13Q9BPV8 354 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 PARD6AQ9NPB6 346 aa20.14■□□□□ 0.81
SPSB3-210ENST00000568416 RIF1Q5UIP0 2472 aaKnown RBP20.14■□□□□ 0.81
SPSB3-210ENST00000568416 GVINP1Q7Z2Y8 2422 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 CLDN5O00501 218 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 OLFM2O95897 454 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 NR3C1P04150 777 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 CDH8P55286 799 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 DLG4P78352 724 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 ZNF667Q5HYK9 610 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 HEATR6Q6AI08 1181 aaKnown RBP20.13■□□□□ 0.81
SPSB3-210ENST00000568416 PRR23BQ6ZRT6 265 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 TTC16Q8NEE8 873 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 SDCBP2Q9H190 292 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 LINC00597Q9H2U6 94 aa20.13■□□□□ 0.81
SPSB3-210ENST00000568416 ATG13O75143 517 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 RNF40O75150 1001 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 RPN1P04843 607 aaKnown RBP20.12■□□□□ 0.81
SPSB3-210ENST00000568416 SYKP43405 635 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 RAP1GAPP47736 663 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 NDUFA8P51970 172 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 SLC7A9P82251 487 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 TAF10Q12962 218 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 RSPO4Q2I0M5 234 aaPredicted RBP20.12■□□□□ 0.81
SPSB3-210ENST00000568416 ZACNQ401N2 412 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 TMC2Q8TDI7 906 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 EZH1Q92800 747 aaPredicted RBP20.12■□□□□ 0.81
SPSB3-210ENST00000568416 CD101Q93033 1021 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 EXOC4Q96A65 974 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 ELMO3Q96BJ8 720 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 RNF38Q9H0F5 515 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 TRAF3IP3Q9Y228 551 aa20.12■□□□□ 0.81
SPSB3-210ENST00000568416 LEFTY2O00292 366 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 OAS1P00973 400 aaKnown RBP20.11■□□□□ 0.81
SPSB3-210ENST00000568416 RETP07949 1114 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 PRR29P0C7W0 189 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 LMNB2Q03252 620 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 FBXO43Q4G163 708 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 PAQR9Q6ZVX9 377 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 DGLUCYQ7Z3D6 616 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 KIAA1958Q8N8K9 716 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 USP18Q9UMW8 372 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 OTOGLQ3ZCN5 2332 aa20.11■□□□□ 0.81
SPSB3-210ENST00000568416 PTPRDP23468 1912 aa20.1■□□□□ 0.81
SPSB3-210ENST00000568416 CCDC163A0A0D9SF12 145 aa20.1■□□□□ 0.81
SPSB3-210ENST00000568416 RHOBTB3O94955 611 aa20.1■□□□□ 0.81
SPSB3-210ENST00000568416 NFATC1O95644 943 aa20.1■□□□□ 0.81
SPSB3-210ENST00000568416 SPEM2Q0P670 501 aa20.1■□□□□ 0.81
SPSB3-210ENST00000568416 NR1H3Q13133 447 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms