RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 EPHB3P54753 998 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 FMO1Q01740 532 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 VEPH1Q14D04 833 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 TDRD12Q587J7 1177 aaKnown RBP16.61■□□□□ 0.25
SPG7-218ENST00000568205 PASD1Q8IV76 773 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 C12orf76Q8N812 135 aaPredicted RBP16.61■□□□□ 0.25
SPG7-218ENST00000568205 CMASQ8NFW8 434 aaPredicted RBP16.61■□□□□ 0.25
SPG7-218ENST00000568205 SECISBP2LQ93073 1101 aaKnown RBP16.61■□□□□ 0.25
SPG7-218ENST00000568205 SPATA17Q96L03 361 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 CEP295NLQ96MC4 621 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 AGPAT1Q99943 283 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 SYT11Q9BT88 431 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 LHX5Q9H2C1 402 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 HAUS4Q9H6D7 363 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 CLEC1BQ9P126 229 aa16.61■□□□□ 0.25
SPG7-218ENST00000568205 BZW2Q9Y6E2 419 aaKnown RBP16.61■□□□□ 0.25
SPG7-218ENST00000568205 TULP2O00295 520 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 XPO1O14980 1071 aaKnown RBP16.6■□□□□ 0.25
SPG7-218ENST00000568205 CCL16O15467 120 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 XYLBO75191 536 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 PAPLNO95428 1278 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 LSM8O95777 96 aaKnown RBP16.6■□□□□ 0.25
SPG7-218ENST00000568205 HOXB8P17481 243 aaPredicted RBP16.6■□□□□ 0.25
SPG7-218ENST00000568205 GPD2P43304 727 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 PLA2G4AP47712 749 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 WDR59Q6PJI9 974 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 TRIM72Q6ZMU5 477 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 EP400NLQ6ZTU2 488 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 ZNF571Q7Z3V5 609 aaPredicted RBP16.6■□□□□ 0.25
SPG7-218ENST00000568205 PIGZQ86VD9 579 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 OLIG1Q8TAK6 271 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 GPR152Q8TDT2 470 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 GIPC2Q8TF65 315 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 PPM1EQ8WY54 764 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 ZNF707Q96C28 371 aaPredicted RBP16.6■□□□□ 0.25
SPG7-218ENST00000568205 PRKD2Q9BZL6 878 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 UBXN6Q9BZV1 441 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 PNPLA8Q9NP80 782 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 ASB3Q9Y575 518 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 CEP83Q9Y592 693 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 SZT2Q5T011 3432 aa16.6■□□□□ 0.25
SPG7-218ENST00000568205 CCDC195A0A1B0GUA6 201 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 SLC38A8A6NNN8 435 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 HHLA1C9JL84 531 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 CDH5P33151 784 aaPredicted RBP16.59■□□□□ 0.25
SPG7-218ENST00000568205 LTBRP36941 435 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 DLX2Q07687 328 aaPredicted RBP16.59■□□□□ 0.25
SPG7-218ENST00000568205 SKIV2LQ15477 1246 aaKnown RBP16.59■□□□□ 0.25
SPG7-218ENST00000568205 RARS2Q5T160 578 aaKnown RBP16.59■□□□□ 0.25
SPG7-218ENST00000568205 SYCE2Q6PIF2 218 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 TMC5Q6UXY8 1006 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 DENND5BQ6ZUT9 1274 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 ITIH5Q86UX2 942 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 ELMOD1Q8N336 334 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 WDTC1Q8N5D0 677 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 TMEM35BQ8NCS4 154 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 C1orf131Q8NDD1 294 aaKnown RBP16.59■□□□□ 0.25
SPG7-218ENST00000568205 STKLD1Q8NE28 680 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 SLC35F5Q8WV83 523 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 PANX2Q96RD6 677 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 PCDHB18PQ96TA0 734 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 SEPT11Q9NVA2 429 aaKnown RBP16.59■□□□□ 0.25
SPG7-218ENST00000568205 ARHGAP20Q9P2F6 1191 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
SPG7-218ENST00000568205 TNFRSF10BO14763 440 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 CYP1A1P04798 512 aaPredicted RBP16.58■□□□□ 0.24
SPG7-218ENST00000568205 PLEKP08567 350 aaPredicted RBP16.58■□□□□ 0.24
SPG7-218ENST00000568205 CSH1P0DML2 217 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 CSH2P0DML3 217 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 TNFAIP3P21580 790 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 RGS7P49802 495 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 SLC5A3P53794 718 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 PDCLQ13371 301 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 TAF12Q16514 161 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 PMF1Q6P1K2 205 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 GPRIN1Q7Z2K8 1008 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 DNAJB7Q7Z6W7 309 aaPredicted RBP16.58■□□□□ 0.24
SPG7-218ENST00000568205 VPS36Q86VN1 386 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 NUP93Q8N1F7 819 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 KCTD13Q8WZ19 329 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 SMG7Q92540 1137 aaKnown RBP16.58■□□□□ 0.24
SPG7-218ENST00000568205 PSMG2Q969U7 264 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 HSFY1Q96LI6 401 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 ZNF512Q96ME7 567 aaPredicted RBP16.58■□□□□ 0.24
SPG7-218ENST00000568205 NOX5Q96PH1 765 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 CYTH4Q9UIA0 394 aa16.58■□□□□ 0.24
SPG7-218ENST00000568205 RTN3O95197 1032 aaPredicted RBP16.57■□□□□ 0.24
SPG7-218ENST00000568205 HMGA1P17096 107 aaKnown RBP16.57■□□□□ 0.24
SPG7-218ENST00000568205 EIF4A3P38919 411 aaKnown RBP16.57■□□□□ 0.24
SPG7-218ENST00000568205 KIF11P52732 1056 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 GSDMDP57764 484 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 USP46P62068 366 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 NOMO3P69849 1222 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 CDK17Q00537 523 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 CLEC16AQ2KHT3 1053 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 RAB41Q5JT25 222 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 NAA35Q5VZE5 725 aa16.57■□□□□ 0.24
SPG7-218ENST00000568205 CYP26C1Q6V0L0 522 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms