RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CNOT6LQ96LI5 555 aaKnown RBP16.59■□□□□ 0.25
PALB2-205ENST00000567003 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 PCIF1Q9H4Z3 704 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 PDE11AQ9HCR9 933 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 MMP17Q9ULZ9 603 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 ARHGAP26Q9UNA1 814 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 DMXL2Q8TDJ6 3036 aa16.59■□□□□ 0.25
PALB2-205ENST00000567003 PI4KAP42356 2102 aa16.58■□□□□ 0.25
PALB2-205ENST00000567003 MYMKA6NI61 221 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 LEFTY2O00292 366 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 GCNT3O95395 438 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 NFATC1O95644 943 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 CYP17A1P05093 508 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 BDNFP23560 247 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 LMO2P25791 158 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 SLC6A11P48066 632 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 CFAP221Q4G0U5 840 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 FILIP1Q7Z7B0 1213 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 ALLCQ8N6M5 410 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 TOP6BLQ8N6T0 577 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 LRRC52Q8N7C0 313 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 KBTBD7Q8WVZ9 684 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 ACCSQ96QU6 501 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 SYT15Q9BQS2 421 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 ADAM33Q9BZ11 813 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 CRTAC1Q9NQ79 661 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 SMPD4Q9NXE4 827 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 GDAP2Q9NXN4 497 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 ITGA11Q9UKX5 1188 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 PTPRJQ12913 1337 aa16.58■□□□□ 0.24
PALB2-205ENST00000567003 ATXN2Q99700 1313 aaKnown RBP16.58■□□□□ 0.24
PALB2-205ENST00000567003 ADAMTS9Q9P2N4 1935 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 GABRDO14764 452 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 KLF8O95600 359 aaPredicted RBP16.57■□□□□ 0.24
PALB2-205ENST00000567003 CHRM1P11229 460 aaPredicted RBP16.57■□□□□ 0.24
PALB2-205ENST00000567003 TCF3P15923 654 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 PCSK1P29120 753 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 MAPK8P45983 427 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 LHX1P48742 406 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 CRY1Q16526 586 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 EMC10Q5UCC4 262 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 FAM171BQ6P995 826 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 C12orf40Q86WS4 652 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 KDF1Q8NAX2 398 aaPredicted RBP16.57■□□□□ 0.24
PALB2-205ENST00000567003 TXNDC5Q8NBS9 432 aaKnown RBP16.57■□□□□ 0.24
PALB2-205ENST00000567003 OR5B17Q8NGF7 314 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 CACTINQ8WUQ7 758 aaKnown RBP16.57■□□□□ 0.24
PALB2-205ENST00000567003 DNAJC19Q96DA6 116 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 FUBP3Q96I24 572 aaKnown RBP eCLIP16.57■□□□□ 0.24
PALB2-205ENST00000567003 SCNM1Q9BWG6 230 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 FSCN3Q9NQT6 498 aa16.57■□□□□ 0.24
PALB2-205ENST00000567003 MYO18AQ92614 2054 aaKnown RBP16.57■□□□□ 0.24
PALB2-205ENST00000567003 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 SGK1O00141 431 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 PDGFRBP09619 1106 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 TIE1P35590 1138 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 GRIK1P39086 918 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 MAGEA11P43364 429 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 VASPP50552 380 aaPredicted RBP16.56■□□□□ 0.24
PALB2-205ENST00000567003 RBP5P82980 135 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 CYP27A1Q02318 531 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 KDSRQ06136 332 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 COL9A2Q14055 689 aaPredicted RBP16.56■□□□□ 0.24
PALB2-205ENST00000567003 RABEP1Q15276 862 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 C8orf34Q49A92 452 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 C11orf74Q86VG3 221 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 TMEFF1Q8IYR6 380 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 GATA6Q92908 595 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 FNBP1Q96RU3 617 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 RNF38Q9H0F5 515 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 TMEM74BQ9NUR3 256 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 MAGEC2Q9UBF1 373 aaPredicted RBP16.56■□□□□ 0.24
PALB2-205ENST00000567003 MBD1Q9UIS9 605 aaPredicted RBP16.56■□□□□ 0.24
PALB2-205ENST00000567003 EXOC7Q9UPT5 735 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 CPQQ9Y646 472 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
PALB2-205ENST00000567003 NBEAQ8NFP9 2946 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 PRPF6O94906 941 aaKnown RBP16.55■□□□□ 0.24
PALB2-205ENST00000567003 ABL1P00519 1130 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 CEACAM1P13688 526 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 CSRP1P21291 193 aaKnown RBP16.55■□□□□ 0.24
PALB2-205ENST00000567003 PTGER3P43115 390 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 DHCR24Q15392 516 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 TRIM61Q5EBN2 209 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 LARP1BQ659C4 914 aaKnown RBP16.55■□□□□ 0.24
PALB2-205ENST00000567003 C4orf50Q6ZRC1 276 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 DENND5BQ6ZUT9 1274 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 SYCP3Q8IZU3 236 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 IL17RCQ8NAC3 791 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 OLIG1Q8TAK6 271 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 SPATA17Q96L03 361 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 CLIC6Q96NY7 704 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 TRPM5Q9NZQ8 1165 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 NME7Q9Y5B8 376 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 LAMA5O15230 3695 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 PCNX2A6NKB5 2137 aa16.55■□□□□ 0.24
PALB2-205ENST00000567003 FREM2Q5SZK8 3169 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms