RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TSTD1Q8NFU3 115 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 KBTBD7Q8WVZ9 684 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 ZC3H10Q96K80 434 aaKnown RBP17.65■□□□□ 0.42
TSR3-202ENST00000566296 MMS19Q96T76 1030 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 ZSCAN16Q9H4T2 348 aaPredicted RBP17.65■□□□□ 0.42
TSR3-202ENST00000566296 CRTAC1Q9NQ79 661 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 POLR3BQ9NW08 1133 aaPredicted RBP17.65■□□□□ 0.42
TSR3-202ENST00000566296 HSPBP1Q9NZL4 362 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 PTPRJQ12913 1337 aa17.65■□□□□ 0.42
TSR3-202ENST00000566296 EIF3DO15371 548 aaKnown RBP eCLIP17.64■□□□□ 0.41
TSR3-202ENST00000566296 ATP2C2O75185 946 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 ASIC1P78348 528 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 AMPD3Q01432 767 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 PLA2G2CQ5R387 149 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 STPG1Q5TH74 334 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 C11orf74Q86VG3 221 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 CHAMP1Q96JM3 812 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 FNBP1Q96RU3 617 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 SNX25Q9H3E2 840 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 CUEDC2Q9H467 287 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 EBF1Q9UH73 591 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 MTMR6Q9Y217 621 aa17.64■□□□□ 0.41
TSR3-202ENST00000566296 PDGFRBP09619 1106 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 DLATP10515 647 aaKnown RBP17.63■□□□□ 0.41
TSR3-202ENST00000566296 LMO2P25791 158 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 GBP1P32455 592 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 NASPP49321 788 aaPredicted RBP17.63■□□□□ 0.41
TSR3-202ENST00000566296 DGKEP52429 567 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 TNNC1P63316 161 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 ST3GAL2Q16842 350 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 MDH1BQ5I0G3 518 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 LIMS2Q7Z4I7 341 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 MYCBPAPQ8TBZ2 947 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 EZH1Q92800 747 aaPredicted RBP17.63■□□□□ 0.41
TSR3-202ENST00000566296 PCED1BQ96HM7 432 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 SMOC1Q9H4F8 434 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 UBE4BO95155 1302 aa17.63■□□□□ 0.41
TSR3-202ENST00000566296 LEFTY2O00292 366 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 TNNI1P19237 187 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 PPP3CCP48454 512 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 USP46P62068 366 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 CREB5Q02930 508 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 SNRNP35Q16560 246 aaKnown RBP17.62■□□□□ 0.41
TSR3-202ENST00000566296 FAM26FQ5R3K3 315 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 RNF43Q68DV7 783 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 HS2ST1Q7LGA3 356 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 TRAPPC11Q7Z392 1133 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 GLIS3Q8NEA6 775 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 OR6B3Q8NGW1 331 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 HPS3Q969F9 1004 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 CGRRF1Q99675 332 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 MRPL45Q9BRJ2 306 aaKnown RBP17.62■□□□□ 0.41
TSR3-202ENST00000566296 TTLL2Q9BWV7 592 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 TRIM9Q9C026 710 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 DUSP15Q9H1R2 295 aaPredicted RBP17.62■□□□□ 0.41
TSR3-202ENST00000566296 RXFP3Q9NSD7 469 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 CIZ1Q9ULV3 898 aaPredicted RBP17.62■□□□□ 0.41
TSR3-202ENST00000566296 NUP205Q92621 2012 aa17.62■□□□□ 0.41
TSR3-202ENST00000566296 F8VP50 259 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 SLC9A3R1O14745 358 aaPredicted RBP17.61■□□□□ 0.41
TSR3-202ENST00000566296 TACC1O75410 805 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 ABL1P00519 1130 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
TSR3-202ENST00000566296 SEC13P55735 322 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 NUCB2P80303 420 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 SLC7A9P82251 487 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 USP39Q53GS9 565 aaKnown RBP17.61■□□□□ 0.41
TSR3-202ENST00000566296 ABCA7Q8IZY2 2146 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 KIAA1958Q8N8K9 716 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 USP33Q8TEY7 942 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 DHX58Q96C10 678 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 C8orf48Q96LL4 319 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 SLITRK1Q96PX8 696 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 EDEM2Q9BV94 578 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 ELOVL4Q9GZR5 314 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 LINC00597Q9H2U6 94 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 AGPAT3Q9NRZ7 376 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 KBTBD4Q9NVX7 518 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 ANGPTL2Q9UKU9 493 aa17.61■□□□□ 0.41
TSR3-202ENST00000566296 THADAQ6YHU6 1953 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 ZNF840PA6NDX5 716 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 DCLK1O15075 740 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 SPTLC2O15270 562 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 PPP6R2O75170 966 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 KRT37O76014 449 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 CLSTN1O94985 981 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 CAVIN2O95810 425 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 GNL1P36915 607 aaPredicted RBP17.6■□□□□ 0.41
TSR3-202ENST00000566296 OPRD1P41143 372 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 CYP2J2P51589 502 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 NOP14P78316 857 aaKnown RBP17.6■□□□□ 0.41
TSR3-202ENST00000566296 TRPC3Q13507 836 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 PSMD6Q15008 389 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 TDRD10Q5VZ19 366 aaKnown RBP17.6■□□□□ 0.41
TSR3-202ENST00000566296 ANO7Q6IWH7 933 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 FILIP1Q7Z7B0 1213 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 DDX42Q86XP3 938 aaKnown RBP eCLIP17.6■□□□□ 0.41
TSR3-202ENST00000566296 IQUBQ8NA54 791 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 RDH13Q8NBN7 331 aa17.6■□□□□ 0.41
TSR3-202ENST00000566296 LINC00301Q8NCQ3 95 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms