RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RPL34P49207 117 aaKnown RBP13.35□□□□□ -0.27
SF3B3-206ENST00000565990 CACNA2D1P54289 1103 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 ANKRD54Q6NXT1 300 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 SYCE2Q6PIF2 218 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 ELMSAN1Q6PJG2 1045 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 CYP26C1Q6V0L0 522 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 CLEC20AQ6ZU45 233 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 FAM35AQ86V20 835 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 WDTC1Q8N5D0 677 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 TTC9BQ8N6N2 239 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 EPS8L1Q8TE68 723 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 STK32AQ8WU08 396 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 SLC35F5Q8WV83 523 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 SMARCD1Q96GM5 515 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 SMOQ99835 787 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 SYT11Q9BT88 431 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 S1PR5Q9H228 398 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 PNPLA8Q9NP80 782 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 FAM49BQ9NUQ9 324 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 DZANK1Q9NVP4 752 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 FAM53CQ9NYF3 392 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 BZW2Q9Y6E2 419 aaKnown RBP13.35□□□□□ -0.27
SF3B3-206ENST00000565990 ATP8B3O60423 1300 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 DENND4CQ5VZ89 1909 aa13.35□□□□□ -0.27
SF3B3-206ENST00000565990 HHLA1C9JL84 531 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 PRRG1O14668 218 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 TRIM66O15016 1216 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 AP1G2O75843 785 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 C8AP07357 584 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 CFHP08603 1231 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 SRGAP2BP0DMP2 458 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 BRD2P25440 801 aaKnown RBP13.34□□□□□ -0.27
SF3B3-206ENST00000565990 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
SF3B3-206ENST00000565990 GRIK1P39086 918 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 CDR1P51861 262 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 RPL10AP62906 217 aaKnown RBP13.34□□□□□ -0.27
SF3B3-206ENST00000565990 CDR2Q01850 454 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 DLX2Q07687 328 aaPredicted RBP13.34□□□□□ -0.27
SF3B3-206ENST00000565990 DMTNQ08495 405 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 MGAT5BQ3V5L5 792 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 HGSNATQ68CP4 663 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 TTC30AQ86WT1 665 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 TMEM139Q8IV31 216 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 OLIG1Q8TAK6 271 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 SLC7A14Q8TBB6 771 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 ZNF592Q92610 1267 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 ZNF707Q96C28 371 aaPredicted RBP13.34□□□□□ -0.27
SF3B3-206ENST00000565990 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 MED10Q9BTT4 135 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 PRKD2Q9BZL6 878 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
SF3B3-206ENST00000565990 COMMD8Q9NX08 183 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 IL37Q9NZH6 218 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 C2orf16Q68DN1 1984 aa13.34□□□□□ -0.27
SF3B3-206ENST00000565990 CCDC195A0A1B0GUA6 201 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 EFCAB8A8MWE9 144 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 AKR1B15C9JRZ8 316 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-206ENST00000565990 THAP12O43422 761 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 MFAP3LO75121 409 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 MICAL2O94851 1124 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 FAM200BP0CF97 657 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 H2AFXP16104 143 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-206ENST00000565990 NPR3P17342 541 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 ATF6P18850 670 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 ADORA2BP29275 332 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 EPHB3P54753 998 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 ADKP55263 362 aaKnown RBP13.33□□□□□ -0.28
SF3B3-206ENST00000565990 CDK17Q00537 523 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 TWF1Q12792 350 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 PLD1Q13393 1074 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 DDR2Q16832 855 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 GOLGA7BQ2TAP0 167 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 RAB41Q5JT25 222 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 PPM1LQ5SGD2 360 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 LIN9Q5TKA1 542 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 WDR59Q6PJI9 974 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 CNGA4Q8IV77 575 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 REXO1L1PQ8IX06 675 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 TC2NQ8N9U0 490 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 UBA3Q8TBC4 463 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 KCTD13Q8WZ19 329 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 MYRFLQ96LU7 910 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 SEPT5Q99719 369 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-206ENST00000565990 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-206ENST00000565990 AGPAT1Q99943 283 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 LRRC3Q9BY71 257 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
SF3B3-206ENST00000565990 TRMT1Q9NXH9 659 aaKnown RBP13.33□□□□□ -0.28
SF3B3-206ENST00000565990 HESX1Q9UBX0 185 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 YIPF1Q9Y548 306 aa13.33□□□□□ -0.28
SF3B3-206ENST00000565990 FAM92AA1XBS5 289 aa13.32□□□□□ -0.28
SF3B3-206ENST00000565990 F8VP50 259 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms