RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 GJA4P35212 333 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
FANCA-218ENST00000565582 ZXDBP98169 803 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 STK4Q13043 487 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 BIRC3Q13489 604 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 TRPC3Q13507 836 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 KNOP1Q1ED39 458 aaKnown RBP12.73□□□□□ -0.37
FANCA-218ENST00000565582 EML3Q32P44 896 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
FANCA-218ENST00000565582 VSTM1Q6UX27 236 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 DENND5BQ6ZUT9 1274 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 CEP68Q76N32 757 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 CPA6Q8N4T0 437 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 OSCP1Q8WVF1 389 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 SPATA17Q96L03 361 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 XYLT2Q9H1B5 865 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 ECT2Q9H8V3 914 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 SMPD4Q9NXE4 827 aa12.73□□□□□ -0.37
FANCA-218ENST00000565582 A0A1B0GVL5 298 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 PVALEFA0A1B0GWK0 134 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 ANTXRLA6NF34 631 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
FANCA-218ENST00000565582 A8MXQ7 604 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 TRDMT1O14717 391 aaKnown RBP12.72□□□□□ -0.37
FANCA-218ENST00000565582 PHACTR2O75167 634 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 TACC1O75410 805 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 ABL1P00519 1130 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 PFKFB1P16118 471 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 PTPN1P18031 435 aaKnown RBP12.72□□□□□ -0.37
FANCA-218ENST00000565582 HDCP19113 662 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 GALK1P51570 392 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 CDH8P55286 799 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 LMNB2Q03252 620 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 ORC1Q13415 861 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 MAPRE1Q15691 268 aaKnown RBP12.72□□□□□ -0.37
FANCA-218ENST00000565582 CCDC6Q16204 474 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 ZNF699Q32M78 642 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 KMT5BQ4FZB7 885 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 C12orf56Q8IXR9 622 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 SYNPOQ8N3V7 929 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 FAM160A2Q8N612 972 aaPredicted RBP12.72□□□□□ -0.37
FANCA-218ENST00000565582 FSIP1Q8NA03 581 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 ATP2A3Q93084 1043 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 PAGE5Q96GU1 130 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 B3GNT5Q9BYG0 378 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 SDCBP2Q9H190 292 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 LINC00597Q9H2U6 94 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 EXOC1Q9NV70 894 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 TRPM5Q9NZQ8 1165 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 CDV3Q9UKY7 258 aaKnown RBP12.72□□□□□ -0.37
FANCA-218ENST00000565582 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 MYO16Q9Y6X6 1858 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 KIAA1549LQ6ZVL6 1849 aa12.72□□□□□ -0.37
FANCA-218ENST00000565582 ZNF840PA6NDX5 716 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 SOBPA7XYQ1 873 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 LEFTY2O00292 366 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 TRIM66O15016 1216 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 VNN1O95497 513 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 RETP07949 1114 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 SLFN14P0C7P3 912 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 ATXN1P54253 815 aaKnown RBP12.71□□□□□ -0.37
FANCA-218ENST00000565582 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
FANCA-218ENST00000565582 DLG4P78352 724 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 PSMD2Q13200 908 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 GPR161Q8N6U8 529 aaKnown RBP12.71□□□□□ -0.37
FANCA-218ENST00000565582 B3GALNT2Q8NCR0 500 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 RPLP0P6Q8NHW5 317 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 C8orf48Q96LL4 319 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 TTLL2Q9BWV7 592 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 ELOVL4Q9GZR5 314 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.71□□□□□ -0.374e-21■■■■■ 95
FANCA-218ENST00000565582 SEMA4GQ9NTN9 838 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 HMGXB4Q9UGU5 601 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 CFAP45Q9UL16 551 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 SLC8A2Q9UPR5 921 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 CPQQ9Y646 472 aa12.71□□□□□ -0.37
FANCA-218ENST00000565582 ATG2BQ96BY7 2078 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.7□□□□□ -0.38
FANCA-218ENST00000565582 DCDC2BA2VCK2 349 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 RPP40O75818 363 aaKnown RBP12.7□□□□□ -0.38
FANCA-218ENST00000565582 DRD1P21728 446 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 SEC13P55735 322 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 NOP14P78316 857 aaKnown RBP12.7□□□□□ -0.38
FANCA-218ENST00000565582 TAF10Q12962 218 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 NCOA4Q13772 614 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 FILIP1Q7Z7B0 1213 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 FAM35AQ86V20 835 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 KBTBD6Q86V97 674 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 SFTPA1Q8IWL2 248 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 PARD3BQ8TEW8 1205 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 CD101Q93033 1021 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 SYAP1Q96A49 352 aaPredicted RBP12.7□□□□□ -0.38
FANCA-218ENST00000565582 KCNK16Q96T55 309 aa12.7□□□□□ -0.38
FANCA-218ENST00000565582 RNF38Q9H0F5 515 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms