RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 WDR5BQ86VZ2 330 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 ARL14EPQ8N8R7 260 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 FAM84AQ96KN4 292 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 P2RY13Q9BPV8 354 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 MRPL45Q9BRJ2 306 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 ECT2Q9H8V3 914 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 TRPC7Q9HCX4 862 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 EXOC1Q9NV70 894 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 COMMD8Q9NX08 183 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 SERTAD1Q9UHV2 236 aa12.99□□□□□ -0.33
GTF3C1-204ENST00000564664 DCHS1Q96JQ0 3298 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 ATP8B3O60423 1300 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 ZNF840PA6NDX5 716 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 OTOL1A6NHN0 477 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 A8MXQ7 604 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 SLC9A3R1O14745 358 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 IKBKBO14920 756 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 HCRTO43612 131 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 ACTN4O43707 911 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 KLRC4O43908 158 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 TGM1P22735 817 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 GJA4P35212 333 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 FNTBP49356 437 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 MYL6P60660 151 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 SLC7A9P82251 487 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 STK4Q13043 487 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 USP4Q13107 963 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 SGSM1Q2NKQ1 1148 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 MDH1BQ5I0G3 518 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 TRIM68Q6AZZ1 485 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 FSTL4Q6MZW2 842 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 Q6ZS52 159 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 B3GALNT2Q8NCR0 500 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 SH3RF2Q8TEC5 729 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 OVCA2Q8WZ82 227 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 TAF4BQ92750 862 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 CCDC47Q96A33 483 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 LOXL4Q96JB6 756 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 TNIP3Q96KP6 325 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 SLITRK1Q96PX8 696 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 XYLT2Q9H1B5 865 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 SLC8A2Q9UPR5 921 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
GTF3C1-204ENST00000564664 C2orf78A6NCI8 922 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 F8VP50 259 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 MAPK13O15264 365 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 AKAP3O75969 853 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 RTN3O95197 1032 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 NFATC1O95644 943 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 C4BPAP04003 597 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 ARSAP15289 507 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 TRIM21P19474 475 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 CASP1P29466 404 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 KRT85P78386 507 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 ENPEPQ07075 957 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 BIRC3Q13489 604 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 NCOA4Q13772 614 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 EML3Q32P44 896 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 KMT5BQ4FZB7 885 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 PRR23BQ6ZRT6 265 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 DDX42Q86XP3 938 aaKnown RBP eCLIP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 NUP93Q8N1F7 819 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 STKLD1Q8NE28 680 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 PDZD8Q8NEN9 1154 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 CD101Q93033 1021 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 SLC22A12Q96S37 553 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 KCTD10Q9H3F6 313 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 HPSEQ9Y251 543 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 FRMD4BQ9Y2L6 1034 aa12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 KIF26AQ9ULI4 1882 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-204ENST00000564664 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 FAM237AA0A1B0GTK4 181 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 OLFM2O95897 454 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 PFKFB1P16118 471 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 YWHAQP27348 245 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 SYKP43405 635 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 PKP1Q13835 747 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 CSRP2Q16527 193 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 NFIL3Q16649 462 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 CCDC142Q17RM4 750 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 SNX30Q5VWJ9 437 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 CEP68Q76N32 757 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 CACNA2D4Q7Z3S7 1137 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 UNC93AQ86WB7 457 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 RIN3Q8TB24 985 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 CHFRQ96EP1 664 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 CCDC34Q96HJ3 373 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 SPATA32Q96LK8 384 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 RTKNQ9BST9 563 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 B3GNT5Q9BYG0 378 aa12.96□□□□□ -0.33
GTF3C1-204ENST00000564664 SCAND2PQ9GZW5 306 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms