RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 MAST2Q6P0Q8 1798 aa12.89□□□□□ -0.35
SCAMP2-204ENST00000563829 GOLGA8IPA6NC78 632 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 GOLGA8JA6NMD2 632 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 ZBTB5O15062 677 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 HALP42357 657 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 MFAP3P55082 362 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 HDAC4P56524 1084 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 EVA1CP58658 441 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 IRX4P78413 519 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 MAP7D1Q3KQU3 841 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 ANKDD1AQ495B1 522 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 C6orf52Q5T4I8 152 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 E2F7Q96AV8 911 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 C1orf21Q9H246 121 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 EFR3BQ9Y2G0 817 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 FOXD2O60548 495 aaPredicted RBP12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 INHBAP08476 426 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 RBP3P10745 1247 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 CIITAP33076 1130 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 NT5C2P49902 561 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 CES4AQ5XG92 561 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 PPP1R18Q6NYC8 613 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 CRLF3Q8IUI8 442 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 DEFB107AQ8IZN7 70 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 TMIGD2Q96BF3 282 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 APOL6Q9BWW8 343 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 TBCCD1Q9NVR7 557 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 CEPT1Q9Y6K0 416 aa12.88□□□□□ -0.35
SCAMP2-204ENST00000563829 IQANK1A0A1B0GTG1 560 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 SH3PXD2BA1X283 911 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 HTR3EA5X5Y0 456 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 ADCY6O43306 1168 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 XPOTO43592 962 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 FAM155BO75949 473 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 STAMBPO95630 424 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 RXRGP48443 463 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 FAM182AQ5T1J6 154 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 Q6ZNX1 250 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 MCOLN2Q8IZK6 566 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 GSDMBQ8TAX9 411 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 PPP4R1Q8TF05 950 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 THEGQ9P2T0 379 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 XPO1O14980 1071 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 DENRO43583 198 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 SERPINA6P08185 405 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 COPAP53621 1224 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 NR1H2P55055 460 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 CLEC16AQ2KHT3 1053 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 USH1GQ495M9 461 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 C1orf186Q6ZWK4 172 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 TRIML2Q8N7C3 387 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 DQX1Q8TE96 717 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 SHC3Q92529 594 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 FIZ1Q96SL8 496 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 CNTN3Q9P232 1028 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 CLEC11AQ9Y240 323 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 ARFGEF1Q9Y6D6 1849 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 PROSCO94903 275 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 TCF4P15884 667 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 NELFEP18615 380 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 ZNF76P36508 570 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 BTDP43251 543 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 SNAP25P60880 206 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 OASLQ15646 514 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 NFIL3Q16649 462 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 DPP8Q6V1X1 898 aaPredicted RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 NUDCD3Q8IVD9 361 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 CTAGE3PQ8IX95 158 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 CCDC24Q8N4L8 307 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 PLEKHO2Q8TD55 490 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 C17orf50Q8WW18 174 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 JADE3Q92613 823 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 P2RX7Q99572 595 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 WDR83Q9BRX9 315 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 SHOC2Q9UQ13 582 aa12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 HBS1LQ9Y450 684 aaKnown RBP12.87□□□□□ -0.35
SCAMP2-204ENST00000563829 KANSL1LA0AUZ9 987 aa12.86□□□□□ -0.35
SCAMP2-204ENST00000563829 H3BNX3 289 aa12.86□□□□□ -0.35
SCAMP2-204ENST00000563829 FBP2O00757 339 aa12.86□□□□□ -0.35
SCAMP2-204ENST00000563829 MSH4O15457 936 aa12.86□□□□□ -0.35
SCAMP2-204ENST00000563829 TBC1D12O60347 775 aa12.86□□□□□ -0.35
SCAMP2-204ENST00000563829 GRIN3BO60391 1043 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms