RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ARMC5Q96C12 935 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 C18orf8Q96DM3 657 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 CAPZA3Q96KX2 299 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 TWNKQ96RR1 684 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 GOLGA2P5Q9HBQ8 144 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 HMGXB4Q9UGU5 601 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 IP6K2Q9UHH9 426 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 TSPAN16Q9UKR8 245 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 L1RE1Q9UN81 338 aa10.24□□□□□ -0.77
UBFD1-202ENST00000563366 MICAL3Q7RTP6 2002 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 GOLGA6L10A0A0M3HER8 536 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 CCDC188H7C350 402 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 PSTPIP1O43586 416 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 PQBP1O60828 265 aaKnown RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 LILRA1O75019 489 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 SRGAP2O75044 1071 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 PROSCO94903 275 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 CALCAP01258 141 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 PCSK1P29120 753 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 CTNNA1P35221 906 aaKnown RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 RFC2P35250 354 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 CETN2P41208 172 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 GPD2P43304 727 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 ACADSBP45954 432 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 GABRB2P47870 512 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 AARSP49588 968 aaKnown RBP eCLIP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 CLCNKBP51801 687 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 BST2Q10589 180 aaKnown RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 PDCLQ13371 301 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 MAMLD1Q13495 774 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 PIGHQ14442 188 aaPredicted RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 MBTPS1Q14703 1052 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 ACAP1Q15027 740 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 GOLGA7BQ2TAP0 167 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 SEL1L2Q5TEA6 688 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 DSTYKQ6XUX3 929 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 ACOT1Q86TX2 421 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 RASGEF1CQ8N431 466 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 PDCL2Q8N4E4 241 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 FNIP1Q8TF40 1166 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 KBTBD7Q8WVZ9 684 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 CLP1Q92989 425 aaKnown RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 SENP8Q96LD8 212 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 NCAPGQ9BPX3 1015 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 ZSWIM1Q9BR11 485 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 MRPL45Q9BRJ2 306 aaKnown RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 MRPL9Q9BYD2 267 aaKnown RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 HIPK3Q9H422 1215 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 TTC7AQ9ULT0 858 aaPredicted RBP10.23□□□□□ -0.77
UBFD1-202ENST00000563366 DNAH12Q6ZR08 3092 aa10.23□□□□□ -0.77
UBFD1-202ENST00000563366 MEIS3P2A8K0S8 358 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 TMEM189-UBE2V1I3L0A0 370 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 J3QL48 77 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 GABRDO14764 452 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 TRAPPC3O43617 180 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 POMCP01189 267 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 CXCL10P02778 98 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 COMTP21964 271 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 CXCR5P32302 372 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 SCNN1AP37088 669 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 GJA8P48165 433 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 RWDD2BP57060 319 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 RNASELQ05823 741 aaKnown RBP10.22□□□□□ -0.77
UBFD1-202ENST00000563366 MAPRE1Q15691 268 aaKnown RBP10.22□□□□□ -0.77
UBFD1-202ENST00000563366 ERCC6LQ2NKX8 1250 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 PTPN20Q4JDL3 420 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 GLE1Q53GS7 698 aaKnown RBP10.22□□□□□ -0.77
UBFD1-202ENST00000563366 NOMO2Q5JPE7 1267 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 DENND1BQ6P3S1 775 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 DCLRE1AQ6PJP8 1040 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 MTERF4Q7Z6M4 381 aaKnown RBP10.22□□□□□ -0.77
UBFD1-202ENST00000563366 RHOT1Q8IXI2 618 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 MMGT1Q8N4V1 131 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 NIPA2Q8N8Q9 360 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 ANKRD52Q8NB46 1076 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 SPATA4Q8NEY3 305 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 COG1Q8WTW3 980 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 MAIP1Q8WWC4 291 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 FAM193BQ96PV7 902 aaPredicted RBP10.22□□□□□ -0.77
UBFD1-202ENST00000563366 PSMB7Q99436 277 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.22□□□□□ -0.771e-7■□□□□ 8.4
UBFD1-202ENST00000563366 GOLPH3Q9H4A6 298 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 CDH9Q9ULB4 789 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 LRFN2Q9ULH4 789 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 PACSIN2Q9UNF0 486 aaPredicted RBP10.22□□□□□ -0.77
UBFD1-202ENST00000563366 INPP5FQ9Y2H2 1132 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 PCDHB7Q9Y5E2 793 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 PCDHA3Q9Y5H8 950 aa10.22□□□□□ -0.77
UBFD1-202ENST00000563366 SCN5AQ14524 2016 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 TARSL2A2RTX5 802 aaKnown RBP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 TMEM191CA6NGB0 347 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 CASTOR2A6NHX0 329 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 SIGLEC16A6NMB1 481 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 TMEM110-MUSTN1A8MSY1 372 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 M0QZQ0 153 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 ZNF185O15231 689 aa10.21□□□□□ -0.77
UBFD1-202ENST00000563366 DDX3YO15523 660 aaKnown RBP10.21□□□□□ -0.77
UBFD1-202ENST00000563366 CEP104O60308 925 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms