RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 APOL5Q9BWW9 433 aa19.9■□□□□ 0.78
RAB40C-207ENST00000563109 PNPLA8Q9NP80 782 aa19.9■□□□□ 0.78
RAB40C-207ENST00000563109 PCDHGC3Q9UN70 934 aa19.9■□□□□ 0.78
RAB40C-207ENST00000563109 GOLGA6L6A8MZA4 724 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 XPO1O14980 1071 aaKnown RBP19.89■□□□□ 0.77
RAB40C-207ENST00000563109 SSTR3P32745 418 aaPredicted RBP19.89■□□□□ 0.77
RAB40C-207ENST00000563109 CLUL1Q15846 466 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 SZT2Q5T011 3432 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 C2orf16Q68DN1 1984 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.89■□□□□ 0.77
RAB40C-207ENST00000563109 UBA3Q8TBC4 463 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 SYN2Q92777 582 aaPredicted RBP19.89■□□□□ 0.77
RAB40C-207ENST00000563109 PSMG2Q969U7 264 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 MSLNLQ96KJ4 702 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 RIPOR3Q96MK2 946 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 KCNK16Q96T55 309 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 ADAM7Q9H2U9 754 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 TMEM30AQ9NV96 361 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 AIPL1Q9NZN9 384 aa19.89■□□□□ 0.77
RAB40C-207ENST00000563109 MYO16Q9Y6X6 1858 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 SLC38A8A6NNN8 435 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 AKR1B15C9JRZ8 316 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 H3BQ06 376 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 MFAP3LO75121 409 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 BEST1O76090 585 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 RTN3O95197 1032 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 PAPLNO95428 1278 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 MRE11P49959 708 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 CDR2Q01850 454 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 PDE4CQ08493 712 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 KLHL30Q0D2K2 578 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 DENND1BQ6P3S1 775 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 DENND5BQ6ZUT9 1274 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 GPR149Q86SP6 731 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 PASD1Q8IV76 773 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 ZMIZ2Q8NF64 920 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 GPR152Q8TDT2 470 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 SECISBP2LQ93073 1101 aaKnown RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 ZNF707Q96C28 371 aaPredicted RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 NOX5Q96PH1 765 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 CORO1BQ9BR76 489 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 ASAH2Q9NR71 780 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 ZNHIT6Q9NWK9 470 aaKnown RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 NOCTQ9UK39 431 aaKnown RBP19.88■□□□□ 0.77
RAB40C-207ENST00000563109 GREB1Q4ZG55 1949 aa19.88■□□□□ 0.77
RAB40C-207ENST00000563109 PTPN2P17706 415 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 MTHFRP42898 656 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 SLC5A3P53794 718 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 TBX2Q13207 712 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 GSE1Q14687 1217 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 PKDCCQ504Y2 493 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 TDRD12Q587J7 1177 aaKnown RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 ATAT1Q5SQI0 421 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 CYP4A22Q5TCH4 519 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 TRIM72Q6ZMU5 477 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 DNAJB7Q7Z6W7 309 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 NUP93Q8N1F7 819 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 LEMD2Q8NC56 503 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 SMRP1Q8NCR6 262 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 OR8K1Q8NGG5 319 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 SLC20A1Q8WUM9 679 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 ANP32BQ92688 251 aaKnown RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 GCNAQ96QF7 691 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 UBXN6Q9BZV1 441 aa19.87■□□□□ 0.77
RAB40C-207ENST00000563109 SEPT11Q9NVA2 429 aaKnown RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 UXTQ9UBK9 157 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 MAGED2Q9UNF1 606 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 BZW2Q9Y6E2 419 aaKnown RBP19.87■□□□□ 0.77
RAB40C-207ENST00000563109 FGF19O95750 216 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 LSM8O95777 96 aaKnown RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 MMEP08473 750 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 PRKCIP41743 596 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 PLA2G4AP47712 749 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 IFRD2Q12894 506 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 SMAD4Q13485 552 aaKnown RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 PABPC1LQ4VXU2 614 aaKnown RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 PDZD4Q76G19 769 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 IRF2BP2Q7Z5L9 587 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 GRASPQ7Z6J2 395 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 PIGZQ86VD9 579 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 TMEM35BQ8NCS4 154 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 STKLD1Q8NE28 680 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 DDX1Q92499 740 aaKnown RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 TRMT2BQ96GJ1 504 aaKnown RBP19.86■□□□□ 0.77
RAB40C-207ENST00000563109 NECTIN4Q96NY8 510 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 S1PR5Q9H228 398 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 LHX5Q9H2C1 402 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 LRRC4Q9HBW1 653 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 ABHD10Q9NUJ1 306 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 COMMD8Q9NX08 183 aa19.86■□□□□ 0.77
RAB40C-207ENST00000563109 SERPING1P05155 500 aa19.85■□□□□ 0.77
RAB40C-207ENST00000563109 RHOP08100 348 aa19.85■□□□□ 0.77
RAB40C-207ENST00000563109 ADKP55263 362 aaKnown RBP19.85■□□□□ 0.77
RAB40C-207ENST00000563109 MTMR3Q13615 1198 aa19.85■□□□□ 0.77
RAB40C-207ENST00000563109 E4F1Q66K89 784 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-207ENST00000563109 VPS36Q86VN1 386 aa19.85■□□□□ 0.77
RAB40C-207ENST00000563109 SIX6OS1Q8N1H7 587 aa19.85■□□□□ 0.77
RAB40C-207ENST00000563109 MSANTD4Q8NCY6 345 aa19.85■□□□□ 0.77
RAB40C-207ENST00000563109 DNAJC7Q99615 494 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms