RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 GPR155Q7Z3F1 870 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 CMTR2Q8IYT2 770 aaKnown RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 SLC44A3Q8N4M1 653 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 SCFD2Q8WU76 684 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 SDR42E1Q8WUS8 393 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 RSAD2Q8WXG1 361 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 MKL1Q969V6 931 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 NEIL1Q96FI4 390 aaPredicted RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 TACO1Q9BSH4 297 aaKnown RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 CD244Q9BZW8 370 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 NYAP2Q9P242 653 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 CA14Q9ULX7 337 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 ZFR2Q9UPR6 939 aaKnown RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 MTF2Q9Y483 593 aaPredicted RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 CTDP1Q9Y5B0 961 aaPredicted RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 SLC30A1Q9Y6M5 507 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 IGF2RP11717 2491 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 RALGAPA2Q2PPJ7 1873 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 TANC1Q9C0D5 1861 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 FAM90A27PA6NNH2 459 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 MATN2O00339 956 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 MAN2B1O00754 1011 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 PRKAB2O43741 272 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 LRP3O75074 770 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 N4BP1O75113 896 aaKnown RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 IDH1O75874 414 aaKnown RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 FGF18O76093 207 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 AMY2AP04746 511 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 RETP07949 1114 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 SRGAP2BP0DMP2 458 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 PTPN1P18031 435 aaKnown RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 AMY2BP19961 511 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 ETV4P43268 484 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 RBM25P49756 843 aaKnown RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 GATMP50440 423 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 STARD6P59095 220 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 STILQ15468 1287 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 GPR19Q15760 415 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 LPAL2Q16609 132 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 DGKDQ16760 1214 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 IL31Q6EBC2 164 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 KIAA1841Q6NSI8 718 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 C19orf48Q6RUI8 117 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 Q6ZSN1 163 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 C16orf86Q6ZW13 317 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 RASGRP2Q7LDG7 609 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 RPAP2Q8IXW5 612 aaPredicted RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 NLGN4XQ8N0W4 816 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 PJA1Q8NG27 643 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 CASP10Q92851 521 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 SPATA9Q9BWV2 254 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 LSM14BQ9BX40 385 aaKnown RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 PCGF6Q9BYE7 350 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 MSL2Q9HCI7 577 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 SLC39A2Q9NP94 309 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 TMEM260Q9NX78 707 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 IGSF9Q9P2J2 1179 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 CLIP2Q9UDT6 1046 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 ADD3Q9UEY8 706 aaKnown RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 GMEB2Q9UKD1 530 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 TRAF6Q9Y4K3 522 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 COL11A1P12107 1806 aaPredicted RBP4.41□□□□□ -1.7
HERC1-211ENST00000560983 RELNP78509 3460 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 IGSF10Q6WRI0 2623 aa4.41□□□□□ -1.7
HERC1-211ENST00000560983 USP9XQ93008 2570 aaPredicted RBP4.4□□□□□ -1.7
HERC1-211ENST00000560983 IGKV6D-41A0A0C4DH26 115 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 TMEM232C9JQI7 657 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 AQP7O14520 342 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 CLASP2O75122 1294 aaKnown RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 CAND2O75155 1236 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 PPFIA4O75335 1185 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 MPIG6BO95866 241 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 GH1P01241 217 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 UBTFL1P0CB47 393 aaPredicted RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 ZNF286BP0CG31 522 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 TDGF1P13385 188 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 AOAHP28039 575 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 HMGA2P52926 109 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 ATP8B2P98198 1209 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 LPIN1Q14693 890 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 PRKD1Q15139 912 aaPredicted RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 RNF151Q2KHN1 245 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 FIGNQ5HY92 759 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 CCDC158Q5M9N0 1113 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 TTC39AQ5SRH9 613 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 RARS2Q5T160 578 aaKnown RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 PLPP4Q5VZY2 271 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 LAIR1Q6GTX8 287 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 XRRA1Q6P2D8 792 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 RNF207Q6ZRF8 634 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 SPATC1Q76KD6 591 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 CXXC5Q7LFL8 322 aaKnown RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 CHST3Q7LGC8 479 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 TAX1BP1Q86VP1 789 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 DHX37Q8IY37 1157 aaKnown RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 FUKQ8N0W3 1084 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 LCORLQ8N3X6 602 aa4.4□□□□□ -1.71
HERC1-211ENST00000560983 CELF5Q8N6W0 485 aaKnown RBP4.4□□□□□ -1.71
HERC1-211ENST00000560983 MRPL43Q8N983 215 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms