RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 NDST1P52848 882 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 EIF3EP60228 445 aaKnown RBP15.31■□□□□ 0.04
CRTC3-210ENST00000560927 IL9RQ01113 521 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 NR1H3Q13133 447 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 DNAJC3Q13217 504 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 C15orf59Q2T9L4 293 aaPredicted RBP15.31■□□□□ 0.04
CRTC3-210ENST00000560927 CYP4V2Q6ZWL3 525 aaPredicted RBP15.31■□□□□ 0.04
CRTC3-210ENST00000560927 TBC1D1Q86TI0 1168 aaPredicted RBP15.31■□□□□ 0.04
CRTC3-210ENST00000560927 LINC01465Q8N7H1 131 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 CCDC63Q8NA47 563 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 TTC13Q8NBP0 860 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 CDCA5Q96FF9 252 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 MAK16Q9BXY0 300 aaKnown RBP15.31■□□□□ 0.04
CRTC3-210ENST00000560927 CXCL16Q9H2A7 254 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 UBN1Q9NPG3 1134 aa15.31■□□□□ 0.04
CRTC3-210ENST00000560927 APOC4-APOC2K7ER74 178 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 PRPF4O43172 522 aaKnown RBP eCLIP15.3■□□□□ 0.04
CRTC3-210ENST00000560927 RNF8O76064 485 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 APOC2P02655 101 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 GTF2A1P52655 376 aaPredicted RBP15.3■□□□□ 0.04
CRTC3-210ENST00000560927 NCALDP61601 193 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 MKRN3Q13064 507 aaKnown RBP15.3■□□□□ 0.04
CRTC3-210ENST00000560927 TMEM132DQ14C87 1099 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 ZNF484Q5JVG2 852 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 PCGF5Q86SE9 256 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 C12orf29Q8N999 325 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 PYROXD1Q8WU10 500 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 THOC1Q96FV9 657 aaKnown RBP15.3■□□□□ 0.04
CRTC3-210ENST00000560927 SMC6Q96SB8 1091 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 PITPNM3Q9BZ71 974 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 MROH8Q9H579 483 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 VRTNQ9H8Y1 702 aa15.3■□□□□ 0.04
CRTC3-210ENST00000560927 DICER1Q9UPY3 1922 aaKnown RBP15.3■□□□□ 0.04
CRTC3-210ENST00000560927 MGRN1O60291 552 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 HMGCRP04035 888 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 RBP3P10745 1247 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 VDRP11473 427 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ATICP31939 592 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 TNFAIP2Q03169 654 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 PPIL2Q13356 520 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 SLC1A5Q15758 541 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 SNCBQ16143 134 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 EFHC2Q5JST6 749 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 SYCP2LQ5T4T6 812 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 MAMDC4Q6UXC1 1216 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ANKLE1Q8NAG6 615 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 FBXO36Q8NEA4 188 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 SPATA18Q8TC71 538 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ASB7Q9H672 318 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 SLCO1B3Q9NPD5 702 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 E5RJQ4 531 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 OSBPP22059 807 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ZNF143P52747 638 aaPredicted RBP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ARL4CP56559 192 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 KCNJ2P63252 427 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 BASP1P80723 227 aaKnown RBP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 CDO1Q16878 200 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 C3orf62Q6ZUJ4 267 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 FAM183BPQ6ZVS7 135 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ZC3H18Q86VM9 953 aaKnown RBP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ECHDC2Q86YB7 292 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 AFG1LQ8WV93 481 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 RXFP2Q8WXD0 754 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 FRMD8P1Q9BZ68 369 aaPredicted RBP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 CYP3A43Q9HB55 503 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 PSMC3IPQ9P2W1 217 aaPredicted RBP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 SLC24A2Q9UI40 661 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 XPO7Q9UIA9 1087 aaKnown RBP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 TSPAN16Q9UKR8 245 aa15.29■□□□□ 0.04
CRTC3-210ENST00000560927 ZMYND8Q9ULU4 1186 aaPredicted RBP15.29■□□□□ 0.04
CRTC3-210ENST00000560927 TYROBPO43914 113 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 PFKMP08237 780 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 CA4P22748 312 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 CDH6P55285 790 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 GEMIN4P57678 1058 aaKnown RBP15.28■□□□□ 0.04
CRTC3-210ENST00000560927 POU5F1BQ06416 359 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 BBS9Q3SYG4 887 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
CRTC3-210ENST00000560927 FBF1Q8TES7 1133 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 ASNSD1Q9NWL6 643 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 DPP3Q9NY33 737 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 BARX2Q9UMQ3 279 aaPredicted RBP15.28■□□□□ 0.04
CRTC3-210ENST00000560927 ASB14A6NK59 587 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 C2CD4BA6NLJ0 364 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 MCF2LO15068 1137 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 TSPAN1O60635 241 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 PDGFRAP16234 1089 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 KRT4P19013 534 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 GJA5P36382 358 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 RGS7P49802 495 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 INCA1Q0VD86 236 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 BNIP1Q12981 228 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 SWT1Q5T5J6 900 aaKnown RBP15.28■□□□□ 0.04
CRTC3-210ENST00000560927 OR6B2Q6IFH4 312 aa15.28■□□□□ 0.04
CRTC3-210ENST00000560927 IGDCC3Q8IVU1 814 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms