RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CPSF3Q9UKF6 684 aaKnown RBP9.63□□□□□ -0.87
RABGGTA-217ENST00000560521 A0A1W2PQD8 194 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 MYMKA6NI61 221 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 LEFTY2O00292 366 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 CBFA2T3O75081 653 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 C1QL1O75973 258 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 KAT7O95251 611 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 SYPP08247 313 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 LIG4P49917 911 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 NCKAP1LP55160 1127 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 C19orf57Q0VDD7 668 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 TRIM29Q14134 588 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 TMEM132DQ14C87 1099 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 DHCR24Q15392 516 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 IL17AQ16552 155 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 NFE2Q16621 373 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 HSF5Q4G112 596 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 TTC38Q5R3I4 469 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 SLC39A4Q6P5W5 647 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 RHBDF2Q6PJF5 856 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 TMPRSS7Q7RTY8 843 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 FILIP1Q7Z7B0 1213 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 MARCH9Q86YJ5 346 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 NAXDQ8IW45 347 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 KCNN1Q92952 543 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 BICD1Q96G01 975 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 PKMYT1Q99640 499 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 MMTAG2Q9BU76 263 aaKnown RBP9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 TIPINQ9BVW5 301 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 DPP3Q9NY33 737 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 KIAA1522Q9P206 1035 aaPredicted RBP9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 ARHGAP26Q9UNA1 814 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 DERAQ9Y315 318 aa9.62□□□□□ -0.87
RABGGTA-217ENST00000560521 CKAP5Q14008 2032 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 PTPRQQ9UMZ3 2332 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 A0A0B4J269 797 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 IGHV1OR15-9A0A0B4J2B8 117 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 NPHP3-ACAD11A0A0J9YXS1 232 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 KPNA7A9QM74 516 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 APODP05090 189 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 GABRG2P18507 467 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 TNFRSF4P43489 277 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 RPL10AP62906 217 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 ATP2C1P98194 919 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 TSPY1Q01534 308 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 KCNB1Q14721 858 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 CCDC142Q17RM4 750 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 SLC36A4Q6YBV0 504 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 CENPQQ7L2Z9 268 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 RABEPKQ7Z6M1 372 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 GLRX5Q86SX6 157 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 PHTF2Q8N3S3 785 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 FSIP1Q8NA03 581 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 SPATA18Q8TC71 538 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 LEO1Q8WVC0 666 aaPredicted RBP9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 MSTO1Q9BUK6 570 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 RNF38Q9H0F5 515 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 ASB7Q9H672 318 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 GTF3C4Q9UKN8 822 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 APOBEC2Q9Y235 224 aaKnown RBP9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 C2CD2Q9Y426 696 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 STK24Q9Y6E0 443 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 NAV2Q8IVL1 2488 aa9.61□□□□□ -0.87
RABGGTA-217ENST00000560521 A0A087WV48 116 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 TRABD2BA6NFA1 517 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 SCAMP3O14828 347 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 HNRNPDLO14979 420 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 PIGRP01833 764 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 ACAT1P24752 427 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 EIF2DP41214 584 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 GRIA2P42262 883 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 ACOT2P49753 483 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 SLC12A3P55017 1021 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 KDSRQ06136 332 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 CYP4F3Q08477 520 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 RESTQ13127 1097 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 CAMK2BQ13554 666 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 PLEKHG6Q3KR16 790 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 INTS6LQ5JSJ4 861 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 KRT79Q5XKE5 535 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 SCARA3Q6AZY7 606 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 OSTM1Q86WC4 334 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 SCUBE3Q8IX30 993 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 PDCL2Q8N4E4 241 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 SYT2Q8N9I0 419 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 TRIML1Q8N9V2 468 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 ZNF419Q96HQ0 510 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 HSPA12BQ96MM6 686 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 PNMA5Q96PV4 448 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 UBL7Q96S82 380 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 ACBD6Q9BR61 282 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 FOXP1Q9H334 677 aaPredicted RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 ARHGEF4Q9NR80 690 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 TOR4AQ9NXH8 423 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 DDX43Q9NXZ2 648 aaKnown RBP9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 CALCOCO1Q9P1Z2 691 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 PCOLCE2Q9UKZ9 415 aa9.6□□□□□ -0.87
RABGGTA-217ENST00000560521 A0A1W2PQF6 199 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms