RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FANCCQ00597 558 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 ZNF394Q53GI3 561 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 PAQR9Q6ZVX9 377 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 RRAGAQ7L523 313 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 FMNL3Q8IVF7 1028 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 ARHGEF19Q8IW93 802 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 NPAS3Q8IXF0 933 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 C12orf29Q8N999 325 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 ANKRD52Q8NB46 1076 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 SLITRK1Q96PX8 696 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 DUSP16Q9BY84 665 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 FAM49BQ9NUQ9 324 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 HESX1Q9UBX0 185 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 CDH22Q9UJ99 828 aa14.81□□□□□ -0.04
PKNOX1-209ENST00000560448 NOTCH4Q99466 2003 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 MED7O43513 233 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 SOAT2O75908 522 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 MYL4P12829 197 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 GABRR2P28476 465 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 ZNF132P52740 706 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 BCAT1P54687 386 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 BPIFB4P59827 614 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 NTHL1P78549 312 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 SLC5A9Q2M3M2 681 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 PPP1R26Q5T8A7 1209 aaPredicted RBP14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 RBBP8NLQ8NC74 664 aaPredicted RBP14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 GIPC2Q8TF65 315 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 SHC3Q92529 594 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 MRPS31Q92665 395 aaKnown RBP14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 KREMEN1Q96MU8 473 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 ERGIC2Q96RQ1 377 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 XPO4Q9C0E2 1151 aaKnown RBP14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 VPS16Q9H269 839 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 IL21Q9HBE4 155 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 IL37Q9NZH6 218 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 IFNKQ9P0W0 207 aa14.8□□□□□ -0.04
PKNOX1-209ENST00000560448 FAM92AA1XBS5 289 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 ANHXE9PGG2 379 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 CLDN5O00501 218 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 SETSIPP0DME0 302 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 ALADP13716 330 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 CCDC130P13994 396 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 UCHL3P15374 230 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 CNGA2Q16280 664 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 KLHDC7AQ5VTJ3 777 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 LCLAT1Q6UWP7 414 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 CLEC20AQ6ZU45 233 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 GAREM2Q75VX8 874 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 HS6ST3Q8IZP7 471 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 ITFG1Q8TB96 612 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 SHKBP1Q8TBC3 707 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 ZNF830Q96NB3 372 aaPredicted RBP14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 MYADMQ96S97 322 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 COL25A1Q9BXS0 654 aaPredicted RBP14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 KCNF1Q9H3M0 494 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 ATXN3LQ9H3M9 355 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 TASP1Q9H6P5 420 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 TRPV4Q9HBA0 871 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 SIX2Q9NPC8 291 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 OBP2AQ9NY56 170 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 DOCK8Q8NF50 2099 aa14.79□□□□□ -0.04
PKNOX1-209ENST00000560448 A0A1W2PRU2 124 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 TNFRSF10AO00220 468 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 O00370 1275 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 TNFRSF10BO14763 440 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 ZNF500O60304 480 aaPredicted RBP14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 F11P03951 625 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 KRT5P13647 590 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 CD19P15391 556 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 YWHAQP27348 245 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 CLCN1P35523 988 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 CCR2P41597 374 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 GPR15P49685 360 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 TUBP50607 506 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 SLC5A3P53794 718 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 UBXN1Q04323 297 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 PTK2Q05397 1052 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 BST2Q10589 180 aaKnown RBP14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 KCNMA1Q12791 1236 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 MTMR3Q13615 1198 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 APTXQ7Z2E3 356 aaKnown RBP14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 CCDC186Q7Z3E2 898 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 RNF135Q8IUD6 432 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 DRC7Q8IY82 874 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 UBALD2Q8IYN6 164 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 FEZF2Q8TBJ5 459 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 SMOQ99835 787 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 STK33Q9BYT3 514 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 ZNF334Q9HCZ1 680 aaPredicted RBP14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 TRPM5Q9NZQ8 1165 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 DNAJC12Q9UKB3 198 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 TSPAN16Q9UKR8 245 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 MAGED2Q9UNF1 606 aaPredicted RBP14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 SORCS3Q9UPU3 1222 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 GREB1Q4ZG55 1949 aa14.78□□□□□ -0.04
PKNOX1-209ENST00000560448 A0A1W2PQC6 194 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 XPO1O14980 1071 aaKnown RBP14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 MOSPD3O75425 235 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 ECI2O75521 394 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms