RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 KCTD13Q8WZ19 329 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 FUBP3Q96I24 572 aaKnown RBP eCLIP12.85□□□□□ -0.35
HERC1-205ENST00000559886 RHOBTB2Q9BYZ6 727 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 UBXN6Q9BZV1 441 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 PALMO75781 387 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 ACADSBP45954 432 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 GLUD2P49448 558 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 MAP3K7CLP57077 242 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 KRT17Q04695 432 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 SMARCB1Q12824 385 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 GPR17Q13304 367 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 PSMD5Q16401 504 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 PPP1R15BQ5SWA1 713 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 SLC8B1Q6J4K2 584 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 DNAJC24Q6P3W2 148 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 SLFN11Q7Z7L1 901 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 FBXO22Q8NEZ5 403 aa12.85□□□□□ -0.35
HERC1-205ENST00000559886 LINC01553A4QN01 128 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 BUB1BO60566 1050 aaPredicted RBP12.84□□□□□ -0.35
HERC1-205ENST00000559886 BMPR1AP36894 532 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 RABGGTBP53611 331 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
HERC1-205ENST00000559886 ZDHHC17Q8IUH5 632 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 KIF18AQ8NI77 898 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 SIGLEC16A6NMB1 481 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 HHLA1C9JL84 531 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 PIK3R2O00459 728 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 CPB1P15086 417 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 CASQ1P31415 396 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 TAP1Q03518 808 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
HERC1-205ENST00000559886 FAM183BPQ6ZVS7 135 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 FEZF2Q8TBJ5 459 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 ZNF592Q92610 1267 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 GDF15Q99988 308 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 ABCB6Q9NP58 842 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
HERC1-205ENST00000559886 ANAPC7Q9UJX3 599 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 RWDD3Q9Y3V2 267 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 JRKLQ9Y4A0 524 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 PCDHB5Q9Y5E4 795 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 CDY1Q9Y6F8 540 aa12.84□□□□□ -0.35
HERC1-205ENST00000559886 RANBP2P49792 3224 aaKnown RBP12.83□□□□□ -0.35
HERC1-205ENST00000559886 TMEM191CA6NGB0 347 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 GRXCR1A8MXD5 290 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 GOLGA8SH3BPF8 625 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 C2CD2LO14523 706 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
HERC1-205ENST00000559886 URODP06132 367 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 CYP2F1P24903 491 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 RPL7AP62424 266 aaKnown RBP12.83□□□□□ -0.36
HERC1-205ENST00000559886 OR6B2Q6IFH4 312 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 C11orf63Q6NUN7 778 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 VSTM1Q6UX27 236 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 SCUBE3Q8IX30 993 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 SYCE1Q8N0S2 351 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 CLSTN3Q9BQT9 956 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 SELENOOQ9BVL4 669 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 TRIM7Q9C029 511 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 PNPLA8Q9NP80 782 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 ABI2Q9NYB9 513 aaPredicted RBP12.83□□□□□ -0.36
HERC1-205ENST00000559886 CTAGE9A4FU28 777 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 ADAM12O43184 909 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 GJB6O95452 261 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 KRT3P12035 628 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 LCP1P13796 627 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 OR1D2P34982 312 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 MAGEA11P43364 429 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 ARPP19P56211 112 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 RAB41Q5JT25 222 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 C2orf15Q8WU43 125 aaKnown RBP12.83□□□□□ -0.36
HERC1-205ENST00000559886 BTBD6Q96KE9 485 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 PGLYRP2Q96PD5 576 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 NAPGQ99747 312 aaPredicted RBP12.83□□□□□ -0.36
HERC1-205ENST00000559886 PLVAPQ9BX97 442 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 UBE2OQ9C0C9 1292 aaKnown RBP12.83□□□□□ -0.36
HERC1-205ENST00000559886 GOLPH3Q9H4A6 298 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 LRRC4Q9HBW1 653 aa12.83□□□□□ -0.36
HERC1-205ENST00000559886 GREB1Q4ZG55 1949 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 MTMR11A4FU01 709 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 MYO1FO00160 1098 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 VNN2O95498 520 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 MYOGP15173 224 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 RPL17P18621 184 aaKnown RBP12.82□□□□□ -0.36
HERC1-205ENST00000559886 CTNNB1P35222 781 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 SCNN1AP37088 669 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 SLC6A3Q01959 620 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 ROR1Q01973 937 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 ADIGQ0VDE8 80 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 MESDQ14696 234 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 FAM102AQ5T9C2 384 aaPredicted RBP12.82□□□□□ -0.36
HERC1-205ENST00000559886 DCUN1D2Q6PH85 259 aa12.82□□□□□ -0.36
HERC1-205ENST00000559886 RNF19BQ6ZMZ0 732 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms