RNA–Protein interactions for RNA: ENST00000559070.5

RNF213-207, Transcript of ring finger protein 213, humanhuman

TSL 1 (best)

Gene RNF213, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-207ENST00000559070 PHF20L1A8MW92 1017 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 CCDC130P13994 396 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 CTNNB1P35222 781 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 CLEC16AQ2KHT3 1053 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 C10orf67Q8IYJ2 551 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 MRPL17Q9NRX2 175 aaKnown RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 STK38LQ9Y2H1 464 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 COL1A1P02452 1464 aaPredicted RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 SF3B1O75533 1304 aaKnown RBP eCLIP11.66□□□□□ -0.549e-6■■■■■ 81.6
RNF213-207ENST00000559070 THEMIS2Q5TEJ8 643 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 NUGGCQ68CJ6 796 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 LRRC55Q6ZSA7 311 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 OTOP2Q7RTS6 562 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 TMEM86AQ8N2M4 240 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 PPHLN1Q8NEY8 458 aaKnown RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 ULK4Q96C45 1275 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 GPR63Q9BZJ6 419 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 VPS28Q9UK41 221 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 GABPB1Q06547 395 aaPredicted RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 C1QBPQ07021 282 aaKnown RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 JAMLQ86YT9 394 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 CARNMT1Q8N4J0 409 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 UCMAQ8WVF2 138 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 ATG4AQ8WYN0 398 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 TEPSINQ96N21 525 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 AIPL1Q9NZN9 384 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 XPO7Q9UIA9 1087 aaKnown RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 MSRAQ9UJ68 235 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 NEU2Q9Y3R4 380 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 MAPK13O15264 365 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 PROSCO94903 275 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 HSPA4LO95757 839 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 CCR1P32246 355 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 NFIL3Q16649 462 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 MCOLN2Q8IZK6 566 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
RNF213-207ENST00000559070 CNOT10Q9H9A5 744 aaKnown RBP11.66□□□□□ -0.54
RNF213-207ENST00000559070 HMGB1P1B2RPK0 211 aaPredicted RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 MICAL2O94851 1124 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 PAEPP09466 180 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 BRAFP15056 766 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 PTPN1P18031 435 aaKnown RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 CASP2P42575 452 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 PRMT2P55345 433 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 RGPD2P0DJD1 1756 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 CNTNAP1P78357 1384 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 ZMYM2Q9UBW7 1377 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 TGFB1I1O43294 461 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 TLL1O43897 1013 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 SELPP16109 830 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 ITIH2P19823 946 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 SPARCL1Q14515 664 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 POLD3Q15054 466 aaPredicted RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 RASSF3Q86WH2 238 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 SIAH1Q8IUQ4 282 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 TFB1MQ8WVM0 346 aaKnown RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 CYTH2Q99418 400 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 CINPQ9BW66 212 aaPredicted RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 TPX2Q9ULW0 747 aaKnown RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 CHMP2BQ9UQN3 213 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 C2CD2Q9Y426 696 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 VSNL1P62760 191 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 OCRLQ01968 901 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 ZACNQ401N2 412 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 FASTKD1Q53R41 847 aaKnown RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 HYIQ5T013 277 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 SYDE1Q6ZW31 735 aaPredicted RBP11.65□□□□□ -0.54
RNF213-207ENST00000559070 DDX42Q86XP3 938 aaKnown RBP eCLIP11.65□□□□□ -0.54
RNF213-207ENST00000559070 SLC9A9Q8IVB4 645 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 PBXIP1Q96AQ6 731 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 ZFP42Q96MM3 310 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 TRIM54Q9BYV2 358 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 ULBP1Q9BZM6 244 aa11.65□□□□□ -0.54
RNF213-207ENST00000559070 RGPD5Q99666 1765 aa11.65□□□□□ -0.55
RNF213-207ENST00000559070 UNCXA6NJT0 531 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 E5RJQ4 531 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 AP3B1O00203 1094 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 XYLBO75191 536 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 STIP1P31948 543 aaKnown RBP11.64□□□□□ -0.55
RNF213-207ENST00000559070 NCKAP1LP55160 1127 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 COPS2P61201 443 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 FAM47EQ6ZV65 393 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 TBC1D1Q86TI0 1168 aaPredicted RBP11.64□□□□□ -0.55
RNF213-207ENST00000559070 DEFB106AQ8N104 65 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 MTMR8Q96EF0 704 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 THOC1Q96FV9 657 aaKnown RBP11.64□□□□□ -0.55
RNF213-207ENST00000559070 DHX33Q9H6R0 707 aaKnown RBP11.64□□□□□ -0.55
RNF213-207ENST00000559070 CHST12Q9NRB3 414 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 LATS2Q9NRM7 1088 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 IPPQ9Y573 584 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 SLC4A7Q9Y6M7 1214 aa11.64□□□□□ -0.55
RNF213-207ENST00000559070 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
RNF213-207ENST00000559070 CBX4O00257 560 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms