RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SNX14Q9Y5W7 946 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 CFAP20Q9Y6A4 193 aaKnown RBP3.63□□□□□ -1.83
HERC1-203ENST00000558532 NEDD4P46934 1319 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 MAP3K5Q99683 1374 aa3.63□□□□□ -1.83
HERC1-203ENST00000558532 TSPOAP1O95153 1857 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 KDM6AO15550 1401 aaPredicted RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 MLH3Q9UHC1 1453 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 FMN2Q9NZ56 1722 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 A0A087WUV0 522 aaPredicted RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 CCDC196A0A1B0GTZ2 297 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 GOLGA6L9A6NEM1 432 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 H3BQF6 201 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 KIAA0391O15091 583 aaKnown RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 FYB1O15117 783 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 FOXN1O15353 648 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 SHOX2O60902 331 aaPredicted RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 HAUS5O94927 633 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 ZFPL1O95159 310 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 CD1AP06126 327 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 CCND1P24385 295 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 GJB2P29033 226 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 PRKAR2BP31323 418 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 CCT4P50991 539 aaKnown RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 EIF5P55010 431 aaKnown RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 HSD11B2P80365 405 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 RESTQ13127 1097 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 RAB39AQ14964 217 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 PTPAQ15257 358 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 PABPC1LQ4VXU2 614 aaKnown RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 Q6YL49 198 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 C11orf57Q6ZUT1 292 aaPredicted RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 TADA2BQ86TJ2 420 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 ZBTB46Q86UZ6 589 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 EGFL6Q8IUX8 553 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 DHX40Q8IX18 779 aaKnown RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 TMEM132CQ8N3T6 1108 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 PRR18Q8N4B5 295 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 C8orf58Q8NAV2 365 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 ASB10Q8WXI3 467 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 PGBD1Q96JS3 809 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 CLPTM1LQ96KA5 538 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 AGAP2Q99490 1192 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 MEIS3Q99687 375 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 WDR11Q9BZH6 1224 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 UPF3BQ9BZI7 483 aaKnown RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 FAM107BQ9H098 131 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 RNPEPQ9H4A4 650 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 SERHL2Q9H4I8 314 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 CXorf56Q9H5V9 222 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 ARFGAP3Q9NP61 516 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 DACT1Q9NYF0 836 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 RAI14Q9P0K7 980 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.62□□□□□ -1.83
HERC1-203ENST00000558532 LUC7L2Q9Y383 392 aaKnown RBP3.62□□□□□ -1.83
HERC1-203ENST00000558532 USP54Q70EL1 1684 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 TOPAZ1Q8N9V7 1692 aa3.62□□□□□ -1.83
HERC1-203ENST00000558532 CRB1P82279 1406 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 NCAPD2Q15021 1401 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 EDC4Q6P2E9 1401 aaKnown RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 AGLP35573 1532 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 A0A087X1B8 175 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 LRRC14BA6NHZ5 514 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 NT5C1B-RDH14C9J2C7 533 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 GOLGA6L19H0YKK7 550 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 CHL1O00533 1208 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 CDKL5O76039 1030 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 ABLIM3O94929 683 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 SNUPNO95149 360 aaKnown RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 LARGE1O95461 756 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TUBBP07437 444 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 PDGFRBP09619 1106 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 CKBP12277 381 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 FCER1AP12319 257 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 PROZP22891 400 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 AARSP49588 968 aaKnown RBP eCLIP3.61□□□□□ -1.83
HERC1-203ENST00000558532 EVCP57679 992 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TGFB2P61812 414 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 CXADRP78310 365 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 GUCY1B3Q02153 619 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 CREMQ03060 361 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 DDR1Q08345 913 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 BEND6Q5SZJ8 279 aaPredicted RBP3.61□□□□□ -1.83
HERC1-203ENST00000558532 ATL3Q6DD88 541 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 LAIR1Q6GTX8 287 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 PPP4R3AQ6IN85 833 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 ARMCX5Q6P1M9 558 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 LEKR1Q6ZMV7 388 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 CATIPQ7Z7H3 387 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 MRGPRGQ86SM5 289 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TMEM139Q8IV31 216 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 CNPY4Q8N129 248 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 MIER2Q8N344 545 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 FITM2Q8N6M3 262 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 Q8NA96 180 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 BEND2Q8NDZ0 799 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 ENGASEQ8NFI3 743 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 IL17RDQ8NFM7 739 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TBC1D15Q8TC07 691 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 FAM71BQ8TC56 605 aa3.61□□□□□ -1.83
HERC1-203ENST00000558532 TBC1D22AQ8WUA7 517 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms