RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 MROH8Q9H579 483 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 KCNH7Q9NS40 1196 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 SPATA7Q9P0W8 599 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 MORF4L1Q9UBU8 362 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 TELO2Q9Y4R8 837 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
USP3-206ENST00000558157 ZNFX1Q9P2E3 1918 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 GSTTP1A0A1W2PQM5 241 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 SOWAHBA6NEL2 793 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 CHMP2AO43633 222 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 ZNF862O60290 1169 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 GAS7O60861 476 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 CBFA2T3O75081 653 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 AKAP3O75969 853 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 PGK2P07205 417 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 PLA2G4BP0C869 781 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 KRT15P19012 456 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 MLH1P40692 756 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 PDE1BQ01064 536 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 CENPCQ03188 943 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 ADCY1Q08828 1119 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 SLC1A5Q15758 541 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 ECM1Q16610 540 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 NFIL3Q16649 462 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 TCERG1LQ5VWI1 586 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 XRRA1Q6P2D8 792 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 LVRNQ6Q4G3 990 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 DHDDSQ86SQ9 333 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 VSIG10LQ86VR7 867 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 ZCCHC9Q8N567 271 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 DNERQ8NFT8 737 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 BHMT2Q9H2M3 363 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 USP29Q9HBJ7 922 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 AGO4Q9HCK5 861 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 SUN2Q9UH99 717 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 DNAJC12Q9UKB3 198 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 NUMBLQ9Y6R0 609 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 ADGRA2Q96PE1 1338 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 hCG_2014768A0A024R1R8 64 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 TCRBV7S2A1N4TA0A589 114 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 E9PBE3 544 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 IPO5O00410 1097 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 VARSP26640 1264 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 ADCY8P40145 1251 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 MAGEA4P43358 317 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 CCNA1P78396 465 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 FSTL1Q12841 308 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 PDK3Q15120 406 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 PDCD4Q53EL6 469 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 UGT2A3Q6UWM9 527 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 CENPUQ71F23 418 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 GPBP1Q86WP2 473 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 BBS5Q8N3I7 341 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 DDI1Q8WTU0 396 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 PANX3Q96QZ0 392 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 AGPAT1Q99943 283 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 TEKT3Q9BXF9 490 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 MRPS26Q9BYN8 205 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 RBM38Q9H0Z9 239 aaKnown RBP11.38□□□□□ -0.59
USP3-206ENST00000558157 TBC1D7Q9P0N9 293 aa11.38□□□□□ -0.59
USP3-206ENST00000558157 POTEB3A0JP26 581 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 DDX39AO00148 427 aaKnown RBP11.37□□□□□ -0.59
USP3-206ENST00000558157 EML1O00423 815 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 SPOPO43791 374 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 MED24O75448 989 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 SUPT3HO75486 399 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 CLPTM1O96005 669 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 CYP11B2P19099 503 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 GCAP28676 217 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 TBL3Q12788 808 aaKnown RBP11.37□□□□□ -0.59
USP3-206ENST00000558157 GRM1Q13255 1194 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 KCTD2Q14681 263 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 SEPT7Q16181 437 aaKnown RBP11.37□□□□□ -0.59
USP3-206ENST00000558157 KLHDC10Q6PID8 442 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 POTEBQ6S5H4 581 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 RBM44Q6ZP01 1051 aaKnown RBP11.37□□□□□ -0.59
USP3-206ENST00000558157 SFR1Q86XK3 245 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 RFWD2Q8NHY2 731 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 JADE3Q92613 823 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 SIKE1Q9BRV8 207 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 MKNK1Q9BUB5 465 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 UNC45AQ9H3U1 944 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 TUBA8Q9NY65 449 aaPredicted RBP11.37□□□□□ -0.59
USP3-206ENST00000558157 PSMC3IPQ9P2W1 217 aaPredicted RBP11.37□□□□□ -0.59
USP3-206ENST00000558157 ZNHIT2Q9UHR6 403 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 DCTN4Q9UJW0 460 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 PLA2G4CQ9UP65 541 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 DOCK5Q9H7D0 1870 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 PLXNA1Q9UIW2 1896 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 A0A0G2JND7 137 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 KANSL1LA0AUZ9 987 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 RGS20O76081 388 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 FTLP02792 175 aaPredicted RBP11.37□□□□□ -0.59
USP3-206ENST00000558157 NR3C1P04150 777 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 SMIM18P0DKX4 95 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 GZMAP12544 262 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 VPS41P49754 854 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 GSTM4Q03013 218 aa11.37□□□□□ -0.59
USP3-206ENST00000558157 CDK18Q07002 472 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms