RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SPATA17Q96L03 361 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 ADAM7Q9H2U9 754 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 CSNK1G1Q9HCP0 422 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 AIPL1Q9NZN9 384 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 ASB3Q9Y575 518 aa22.49■■□□□ 1.19
CASC4-204ENST00000557945 PTPRDP23468 1912 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 BRWD1Q9NSI6 2320 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 SLC38A8A6NNN8 435 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 SETSIPP0DME0 302 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 ITIH3Q06033 890 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 MTMR3Q13615 1198 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 E4F1Q66K89 784 aaPredicted RBP22.48■■□□□ 1.19
CASC4-204ENST00000557945 IRF2BP2Q7Z5L9 587 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 DNAJB7Q7Z6W7 309 aaPredicted RBP22.48■■□□□ 1.19
CASC4-204ENST00000557945 GPR149Q86SP6 731 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 SLC20A1Q8WUM9 679 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 CORO1BQ9BR76 489 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 S1PR5Q9H228 398 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 NOCTQ9UK39 431 aaKnown RBP22.48■■□□□ 1.19
CASC4-204ENST00000557945 PCDHGC3Q9UN70 934 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 MAGED2Q9UNF1 606 aaPredicted RBP22.48■■□□□ 1.19
CASC4-204ENST00000557945 COG5Q9UP83 839 aa22.48■■□□□ 1.19
CASC4-204ENST00000557945 CSH1P0DML2 217 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 CSH2P0DML3 217 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 CDC25BP30305 580 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 CDR2Q01850 454 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 GOLGA8FQ08AF8 430 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 GOLGA8DPQ0D2H9 430 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 IFRD2Q12894 506 aaPredicted RBP22.47■■□□□ 1.19
CASC4-204ENST00000557945 TBX2Q13207 712 aaPredicted RBP22.47■■□□□ 1.19
CASC4-204ENST00000557945 GSE1Q14687 1217 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 TSR1Q2NL82 804 aaKnown RBP22.47■■□□□ 1.19
CASC4-204ENST00000557945 PKDCCQ504Y2 493 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 DENND5BQ6ZUT9 1274 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 GRASPQ7Z6J2 395 aaPredicted RBP22.47■■□□□ 1.19
CASC4-204ENST00000557945 ZNF677Q86XU0 584 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 DDX1Q92499 740 aaKnown RBP22.47■■□□□ 1.19
CASC4-204ENST00000557945 SYN2Q92777 582 aaPredicted RBP22.47■■□□□ 1.19
CASC4-204ENST00000557945 PSMG2Q969U7 264 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 CEP295NLQ96MC4 621 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 HCFC1R1Q9NWW0 138 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 CDH22Q9UJ99 828 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 CEP83Q9Y592 693 aa22.47■■□□□ 1.19
CASC4-204ENST00000557945 MYH10P35580 1976 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 AKR1B15C9JRZ8 316 aaPredicted RBP22.46■■□□□ 1.19
CASC4-204ENST00000557945 TULP2O00295 520 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 XPO1O14980 1071 aaKnown RBP22.46■■□□□ 1.19
CASC4-204ENST00000557945 MFAP3LO75121 409 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 MMEP08473 750 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 POU2F2P09086 479 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 PTPN2P17706 415 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 MRE11P49959 708 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 ADKP55263 362 aaKnown RBP22.46■■□□□ 1.19
CASC4-204ENST00000557945 KLHL30Q0D2K2 578 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 ATAT1Q5SQI0 421 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 CYP26C1Q6V0L0 522 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 PIGZQ86VD9 579 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 NUP93Q8N1F7 819 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 SPC24Q8NBT2 197 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 OR8K1Q8NGG5 319 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 PRDM6Q9NQX0 595 aa22.46■■□□□ 1.19
CASC4-204ENST00000557945 SEPT11Q9NVA2 429 aaKnown RBP22.46■■□□□ 1.19
CASC4-204ENST00000557945 SKILP12757 684 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 RGS7P49802 495 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 SLC5A3P53794 718 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 NTHL1P78549 312 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 MEA1Q16626 185 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 CNGA4Q8IV77 575 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 HS6ST3Q8IZP7 471 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 SMRP1Q8NCR6 262 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 RIPOR3Q96MK2 946 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 AGPAT1Q99943 283 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 UBXN6Q9BZV1 441 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 PNPLA8Q9NP80 782 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 ASAH2Q9NR71 780 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 EHD2Q9NZN4 543 aa22.45■■□□□ 1.18
CASC4-204ENST00000557945 DNMT3BQ9UBC3 853 aaKnown RBP22.45■■□□□ 1.18
CASC4-204ENST00000557945 HHLA1C9JL84 531 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 RTN3O95197 1032 aaPredicted RBP22.44■■□□□ 1.18
CASC4-204ENST00000557945 PAPLNO95428 1278 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 RHOP08100 348 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 MYL4P12829 197 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 HMGA1P17096 107 aaKnown RBP22.44■■□□□ 1.18
CASC4-204ENST00000557945 CHRNB2P17787 502 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 GPD2P43304 727 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 PLA2G4AP47712 749 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 USP46P62068 366 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 FMO1Q01740 532 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 PABPC1LQ4VXU2 614 aaKnown RBP22.44■■□□□ 1.18
CASC4-204ENST00000557945 TDRD12Q587J7 1177 aaKnown RBP22.44■■□□□ 1.18
CASC4-204ENST00000557945 CYP4A22Q5TCH4 519 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 GPRIN1Q7Z2K8 1008 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.44■■□□□ 1.18
CASC4-204ENST00000557945 SCAMP5Q8TAC9 235 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 SLC35F5Q8WV83 523 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 LHX5Q9H2C1 402 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 HAUS4Q9H6D7 363 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 LRRC4Q9HBW1 653 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 ST7Q9NRC1 585 aa22.44■■□□□ 1.18
CASC4-204ENST00000557945 ABHD10Q9NUJ1 306 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms