RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 PCED1BQ96HM7 432 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 CHAMP1Q96JM3 812 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 ZFYVE19Q96K21 471 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 MMS19Q96T76 1030 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
PSMC6-215ENST00000557517 SCAND2PQ9GZW5 306 aaPredicted RBP11.31□□□□□ -0.6
PSMC6-215ENST00000557517 SMG9Q9H0W8 520 aaKnown RBP11.31□□□□□ -0.6
PSMC6-215ENST00000557517 GKN1Q9NS71 199 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 ZSCAN32Q9NX65 697 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 NDRG2Q9UN36 371 aaKnown RBP11.31□□□□□ -0.6
PSMC6-215ENST00000557517 MAGED2Q9UNF1 606 aaPredicted RBP11.31□□□□□ -0.6
PSMC6-215ENST00000557517 TRAF3IP3Q9Y228 551 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 CCL26Q9Y258 94 aa11.31□□□□□ -0.6
PSMC6-215ENST00000557517 TRIP11Q15643 1979 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 OTOL1A6NHN0 477 aaPredicted RBP11.3□□□□□ -0.6
PSMC6-215ENST00000557517 KINO60870 393 aaKnown RBP11.3□□□□□ -0.6
PSMC6-215ENST00000557517 TADA3O75528 432 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 RHOBTB3O94955 611 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 RPN1P04843 607 aaKnown RBP11.3□□□□□ -0.6
PSMC6-215ENST00000557517 PTPN1P18031 435 aaKnown RBP11.3□□□□□ -0.6
PSMC6-215ENST00000557517 CTHP32929 405 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 SYKP43405 635 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 NDUFA8P51970 172 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 KPNA1P52294 538 aaPredicted RBP11.3□□□□□ -0.6
PSMC6-215ENST00000557517 NOP14P78316 857 aaKnown RBP11.3□□□□□ -0.6
PSMC6-215ENST00000557517 TNK2Q07912 1038 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 RUNX3Q13761 415 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 CCINQ13939 588 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 DGKKQ5KSL6 1271 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 SYNPOQ8N3V7 929 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 SPEM1Q8N4L4 309 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 ATRIPQ8WXE1 791 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 SYAP1Q96A49 352 aaPredicted RBP11.3□□□□□ -0.6
PSMC6-215ENST00000557517 C8orf48Q96LL4 319 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 CYP2S1Q96SQ9 504 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 TTLL2Q9BWV7 592 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 KIF9Q9HAQ2 790 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 GCNT4Q9P109 453 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 ATP6V1DQ9Y5K8 247 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 CITO14578 2027 aa11.3□□□□□ -0.6
PSMC6-215ENST00000557517 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
PSMC6-215ENST00000557517 MAPK13O15264 365 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 PAPSS2O95340 614 aaPredicted RBP11.29□□□□□ -0.6
PSMC6-215ENST00000557517 TCF3P15923 654 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 PFKLP17858 780 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 BDNFP23560 247 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 HOXA6P31267 233 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 GRIK1P39086 918 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 CXCL12P48061 93 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 SOX9P48436 509 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 PPP3CCP48454 512 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 CASP4P49662 377 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 CCR3P51677 355 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 NRLP54845 237 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 PSMC1P62191 440 aaKnown RBP11.29□□□□□ -0.6
PSMC6-215ENST00000557517 DLG4P78352 724 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 DPYDQ12882 1025 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 TRPC3Q13507 836 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 PPP2R5DQ14738 602 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 NFIL3Q16649 462 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 SGSM1Q2NKQ1 1148 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
PSMC6-215ENST00000557517 TSSK4Q6SA08 328 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 KRBA2Q6ZNG9 492 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 DCLK2Q8N568 766 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 KIAA1958Q8N8K9 716 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 STKLD1Q8NE28 680 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 OR6B3Q8NGW1 331 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 RIN3Q8TB24 985 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 CHFRQ96EP1 664 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 SLC22A12Q96S37 553 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 SNX25Q9H3E2 840 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 EXOC1Q9NV70 894 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 EHD2Q9NZN4 543 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 DOCK6Q96HP0 2047 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 MIA3Q5JRA6 1907 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
PSMC6-215ENST00000557517 A8MXQ7 604 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 TRDMT1O14717 391 aaKnown RBP11.28□□□□□ -0.6
PSMC6-215ENST00000557517 ZNF202O95125 648 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 KIF20AO95235 890 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 VNN1O95497 513 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 NR3C1P04150 777 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 USP17L7P0C7H9 530 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 HDCP19113 662 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 CDH8P55286 799 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 USP46P62068 366 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 TNNC1P63316 161 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 CYP27A1Q02318 531 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 ENPEPQ07075 957 aa11.28□□□□□ -0.6
PSMC6-215ENST00000557517 NCOA4Q13772 614 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms