RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ADAM2Q99965 735 aa5.49□□□□□ -1.53
PRPF39-212ENST00000557477 PTDSS2Q9BVG9 487 aa5.49□□□□□ -1.53
PRPF39-212ENST00000557477 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
PRPF39-212ENST00000557477 SMPD4Q9NXE4 827 aa5.49□□□□□ -1.53
PRPF39-212ENST00000557477 GRHPRQ9UBQ7 328 aa5.49□□□□□ -1.53
PRPF39-212ENST00000557477 NDRG4Q9ULP0 352 aaKnown RBP5.49□□□□□ -1.53
PRPF39-212ENST00000557477 PCDHGB3Q9Y5G1 929 aa5.49□□□□□ -1.53
PRPF39-212ENST00000557477 SHROOM2Q13796 1616 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 DIP2BQ9P265 1576 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 ABCC10Q5T3U5 1492 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 A0A0B4J269 797 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 MYADML2A6NDP7 307 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 F5H697 171 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 NPC1O15118 1278 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 SRGAP2O75044 1071 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 PIAS2O75928 621 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 CSF1RP07333 972 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 CD6P30203 668 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 PPIFP30405 207 aaKnown RBP5.48□□□□□ -1.53
PRPF39-212ENST00000557477 ATICP31939 592 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 GRK6P43250 576 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 VAV2P52735 878 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 SATB1Q01826 763 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 TUBB3Q13509 450 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 HLXQ14774 488 aaPredicted RBP5.48□□□□□ -1.53
PRPF39-212ENST00000557477 CDSNQ15517 529 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 ZNF750Q32MQ0 723 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 ZACNQ401N2 412 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 RAP1GAP2Q684P5 730 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 MICALCLQ6ZW33 695 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 CACNA2D3Q8IZS8 1091 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 ATG16L2Q8NAA4 619 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 CPEB3Q8NE35 698 aaKnown RBP5.48□□□□□ -1.53
PRPF39-212ENST00000557477 DNAJB14Q8TBM8 379 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 ZNF384Q8TF68 577 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 PPP2R3CQ969Q6 453 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 RMDN3Q96TC7 470 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 NELL2Q99435 816 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 PCDHAC1Q9H158 963 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 UNKLQ9H9P5 680 aaKnown RBP5.48□□□□□ -1.53
PRPF39-212ENST00000557477 TM7SF3Q9NS93 570 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 AURKAIP1Q9NWT8 199 aaPredicted RBP5.48□□□□□ -1.53
PRPF39-212ENST00000557477 LUZP4Q9P127 313 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 SERTAD3Q9UJW9 196 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 SSX2IPQ9Y2D8 614 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 NOX1Q9Y5S8 564 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 RUSC2Q8N2Y8 1516 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 SPATA31A3Q5VYP0 1347 aa5.48□□□□□ -1.53
PRPF39-212ENST00000557477 hCG_1642624A0A1W2PR95 340 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 UNC119BA6NIH7 251 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 AQP7P3A6NL99 342 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 KRTAP9-7A8MTY7 169 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 ACKR2O00590 384 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 TRIM38O00635 465 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 PIP5K1BO14986 540 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 CDKL5O76039 1030 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 PECAM1P16284 738 aaPredicted RBP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 EGR1P18146 543 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 GATA3P23771 443 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 DDX6P26196 483 aaKnown RBP eCLIP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 PRKAG1P54619 331 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 SPARCL1Q14515 664 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 USP39Q53GS9 565 aaKnown RBP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 SPDYAQ5MJ70 313 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 C1orf210Q8IVY1 113 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 CCDC28AQ8IWP9 274 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 FAM109AQ8N4B1 249 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 ZNF276Q8N554 614 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 SMCR8Q8TEV9 937 aaPredicted RBP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 STYXQ8WUJ0 223 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 TMEM171Q8WVE6 324 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 CCT6BQ92526 530 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 BOD1Q96IK1 185 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 GBA2Q9HCG7 927 aaPredicted RBP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 AGO4Q9HCK5 861 aaKnown RBP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 GALNT9Q9HCQ5 603 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 NECTIN3Q9NQS3 549 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 TMEM74BQ9NUR3 256 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 LRFN1Q9P244 771 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 CNOT11Q9UKZ1 510 aaKnown RBP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 ZMYND8Q9ULU4 1186 aaPredicted RBP5.47□□□□□ -1.53
PRPF39-212ENST00000557477 HPSEQ9Y251 543 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 MAPKBP1O60336 1514 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 ERICH3Q5RHP9 1530 aa5.47□□□□□ -1.53
PRPF39-212ENST00000557477 CCDC189A1A4V9 331 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 SYT5O00445 386 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 RGS10O43665 173 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 LPXNO60711 386 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 EIF5BO60841 1220 aaKnown RBP5.46□□□□□ -1.54
PRPF39-212ENST00000557477 TNFRSF6BO95407 300 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 HLA-DOAP06340 250 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 PDHA1P08559 390 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 HGFP14210 728 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 VEGFAP15692 232 aaPredicted RBP5.46□□□□□ -1.54
PRPF39-212ENST00000557477 MST1P26927 711 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 ADORA2AP29274 412 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 SP2Q02086 613 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 RAPGEF1Q13905 1077 aa5.46□□□□□ -1.54
PRPF39-212ENST00000557477 TMEM95Q3KNT9 176 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms