RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 KLRF2D3W0D1 207 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 KLF4O43474 513 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 B4GALT4O60513 344 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 NMT2O60551 498 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ZNF623O75123 536 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 RPS6KA5O75582 802 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 KIAA0754O94854 1291 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 FBXO21O94952 628 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 GNA14O95837 355 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ATP1A1P05023 1023 aaKnown RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 KRT18P05783 430 aaKnown RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 GOLGA6DP0CG33 693 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 CYP2D6P10635 497 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PRDX5P30044 214 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 CDC25AP30304 524 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 USP8P40818 1118 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 GRIA2P42262 883 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 AARSP49588 968 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 GMPSP49915 693 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 KIF11P52732 1056 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 RPS8P62241 208 aaKnown RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 HERVK_113P62684 666 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 TNNC1P63316 161 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 C2orf54Q08AI8 447 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SEPT2Q15019 361 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 NPY5RQ15761 445 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SLC4A8Q2Y0W8 1093 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 TTC31Q49AM3 519 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SLC9C1Q4G0N8 1177 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ASPRV1Q53RT3 343 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PAPD7Q5XG87 772 aaKnown RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 TTI2Q6NXR4 508 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 DLK2Q6UY11 383 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 MICALCLQ6ZW33 695 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 UNC13DQ70J99 1090 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 CXXC5Q7LFL8 322 aaKnown RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SRLQ86TD4 932 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 VPS36Q86VN1 386 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 CCDC65Q8IXS2 484 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 IFT20Q8IY31 132 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 TEX11Q8IYF3 940 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 C2orf69Q8N8R5 385 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SLC16A11Q8NCK7 471 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PIP4K2CQ8TBX8 421 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 COG1Q8WTW3 980 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PPM1EQ8WY54 764 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 LARP4BQ92615 738 aaKnown RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ANKS1AQ92625 1134 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 RPGRQ92834 1020 aaKnown RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ARMC5Q96C12 935 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 FAM84BQ96KN1 310 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-241ENST00000556374 DRC1Q96MC2 740 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ZSWIM3Q96MP5 696 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 MED15Q96RN5 788 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ERGIC2Q96RQ1 377 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 EYA3Q99504 573 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SELENOOQ9BVL4 669 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 EDEM3Q9BZQ6 932 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 TRIM9Q9C026 710 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 NT5C3AQ9H0P0 336 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 GLT8D2Q9H1C3 349 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 MEGF9Q9H1U4 602 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SH2D4AQ9H788 454 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 MMRN2Q9H8L6 949 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 RIC8AQ9NPQ8 531 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 GOLGA6AQ9NYA3 693 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 RNF14Q9UBS8 474 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 LRWD1Q9UFC0 647 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 ST6GALNAC2Q9UJ37 374 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 SNX12Q9UMY4 172 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PCDHA6Q9UN73 950 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 L1RE1Q9UN81 338 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 STXBP5LQ9Y2K9 1186 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PCDHA8Q9Y5H6 950 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 PSME4Q14997 1843 aa4.78□□□□□ -1.64
ATXN3-241ENST00000556374 FLT1P17948 1338 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 VCANP13611 3396 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 TRAV20A0A0B4J274 112 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 A0A1W2PPC1 479 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 KLRG2A4D1S0 409 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-241ENST00000556374 SMCO2A6NFE2 343 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 PP2D1A8MPX8 630 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 ADM5C9JUS6 153 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 MYO1CO00159 1063 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 MUSKO15146 869 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 SLC26A4O43511 780 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 KLRC4O43908 158 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 PPFIA4O75335 1185 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 CLSTN1O94985 981 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 HLA-DOAP06340 250 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 GNAT1P11488 350 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 PABPC1P11940 636 aaKnown RBP4.77□□□□□ -1.65
ATXN3-241ENST00000556374 GCFC2P16383 781 aaKnown RBP4.77□□□□□ -1.65
ATXN3-241ENST00000556374 SMARCA1P28370 1054 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 GJA4P35212 333 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 TECP42680 631 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 BTDP43251 543 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 MAGEA1P43355 309 aa4.77□□□□□ -1.65
ATXN3-241ENST00000556374 ITIH3Q06033 890 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms