RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TTC39CQ8N584 583 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 KCTD6Q8NC69 237 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 XPO6Q96QU8 1125 aaKnown RBP25.48■■□□□ 1.67
TMEM260-207ENST00000555497 CNTN3Q9P232 1028 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 PDCD11Q14690 1871 aaKnown RBP25.48■■□□□ 1.67
TMEM260-207ENST00000555497 RNF8O76064 485 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 GPD1P21695 349 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 YARSP54577 528 aaKnown RBP25.48■■□□□ 1.67
TMEM260-207ENST00000555497 CDC42EP1Q00587 391 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 ACAP1Q15027 740 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 SNX17Q15036 470 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 C9orf57Q5W0N0 161 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 CCHCR1Q8TD31 782 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 SERPINB12Q96P63 405 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 RNF39Q9H2S5 420 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 ASNSD1Q9NWL6 643 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 KLK14Q9P0G3 267 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 TPX2Q9ULW0 747 aaKnown RBP25.48■■□□□ 1.67
TMEM260-207ENST00000555497 FAM169AQ9Y6X4 670 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 IFNB1P01574 187 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 PECAM1P16284 738 aaPredicted RBP25.47■■□□□ 1.67
TMEM260-207ENST00000555497 SOWAHAQ2M3V2 549 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 BEST2Q8NFU1 509 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 ATXN2LQ8WWM7 1075 aaKnown RBP25.47■■□□□ 1.67
TMEM260-207ENST00000555497 CENPTQ96BT3 561 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 CNPY3Q9BT09 278 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 DPEP3Q9H4B8 488 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 CREB1P16220 341 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 PDGFRAP16234 1089 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 MAGEA4P43358 317 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 HUNKP57058 714 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 MMRN1Q13201 1228 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 RNASEH2BQ5TBB1 312 aaKnown RBP25.47■■□□□ 1.67
TMEM260-207ENST00000555497 APBB1IPQ7Z5R6 666 aaPredicted RBP25.47■■□□□ 1.67
TMEM260-207ENST00000555497 USP6NLQ92738 828 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 PCDH9Q9HC56 1237 aa25.47■■□□□ 1.67
TMEM260-207ENST00000555497 PIN4Q9Y237 131 aaKnown RBP25.47■■□□□ 1.67
TMEM260-207ENST00000555497 MYL3P08590 195 aa25.46■■□□□ 1.67
TMEM260-207ENST00000555497 PCK1P35558 622 aa25.46■■□□□ 1.67
TMEM260-207ENST00000555497 PDE4CQ08493 712 aa25.46■■□□□ 1.67
TMEM260-207ENST00000555497 LRRC52Q8N7C0 313 aa25.46■■□□□ 1.67
TMEM260-207ENST00000555497 KHSRPQ92945 711 aaKnown RBP eCLIP25.46■■□□□ 1.67
TMEM260-207ENST00000555497 TRIM6Q9C030 488 aaPredicted RBP25.46■■□□□ 1.67
TMEM260-207ENST00000555497 CYP2B6P20813 491 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 CORO7P57737 925 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 FASTKD3Q14CZ7 662 aaKnown RBP25.45■■□□□ 1.67
TMEM260-207ENST00000555497 CCDC142Q17RM4 750 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 UBXN11Q5T124 520 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 CYP4F22Q6NT55 531 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 RFX6Q8HWS3 928 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 CYP4X1Q8N118 509 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 SAYSD1Q9NPB0 183 aa25.45■■□□□ 1.67
TMEM260-207ENST00000555497 SPTLC1O15269 473 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 TCEA3O75764 348 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 CDO1Q16878 200 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 CCDC14Q49A88 953 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 HP1BP3Q5SSJ5 553 aaPredicted RBP25.45■■□□□ 1.66
TMEM260-207ENST00000555497 OLFML1Q6UWY5 402 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 OR6B3Q8NGW1 331 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 SLC35F5Q8WV83 523 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 CFAP57Q96MR6 1250 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 CALN1Q9BXU9 219 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 SLC4A5Q9BY07 1137 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 FOXP3Q9BZS1 431 aa25.45■■□□□ 1.66
TMEM260-207ENST00000555497 STMN4Q9H169 189 aaPredicted RBP25.45■■□□□ 1.66
TMEM260-207ENST00000555497 SMIM28A0A1B0GU29 152 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 ENDOD1O94919 500 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 STILQ15468 1287 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 TAF1CQ15572 869 aaPredicted RBP25.44■■□□□ 1.66
TMEM260-207ENST00000555497 B4GALNT4Q76KP1 1039 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 SCUBE3Q8IX30 993 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 FGFR1P11362 822 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 GAD2Q05329 585 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 UNC45BQ8IWX7 931 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 ARHGEF2Q92974 986 aaKnown RBP25.44■■□□□ 1.66
TMEM260-207ENST00000555497 B3GNT5Q9BYG0 378 aa25.44■■□□□ 1.66
TMEM260-207ENST00000555497 PIRO00625 290 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 CDR1P51861 262 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 ATP11AP98196 1134 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 SOX4Q06945 474 aaPredicted RBP25.43■■□□□ 1.66
TMEM260-207ENST00000555497 IRF5Q13568 498 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 MORF4L2Q15014 288 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 PCBP1Q15365 356 aaKnown RBP eCLIP25.43■■□□□ 1.66
TMEM260-207ENST00000555497 ZNF618Q5T7W0 954 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 NPNTQ6UXI9 565 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 TMEM110Q86TL2 294 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 RASAL3Q86YV0 1011 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 TTC13Q8NBP0 860 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 KBTBD7Q8WVZ9 684 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 PRCCQ92733 491 aaPredicted RBP25.43■■□□□ 1.66
TMEM260-207ENST00000555497 GOLGA2P5Q9HBQ8 144 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.43■■□□□ 1.66
TMEM260-207ENST00000555497 PAPSS1O43252 624 aaPredicted RBP25.43■■□□□ 1.66
TMEM260-207ENST00000555497 PDGFRBP09619 1106 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 DRD4P21917 467 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 LMO2P25791 158 aa25.43■■□□□ 1.66
TMEM260-207ENST00000555497 UBQLN1Q9UMX0 589 aaKnown RBP25.43■■□□□ 1.66
TMEM260-207ENST00000555497 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.43■■□□□ 1.66
TMEM260-207ENST00000555497 AXLP30530 894 aa25.42■■□□□ 1.66
TMEM260-207ENST00000555497 CDH6P55285 790 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms