RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 RAD23BP54727 409 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 ARHGAP44Q17R89 818 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 SYCE2Q6PIF2 218 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 ZNF571Q7Z3V5 609 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-218ENST00000555213 GPR149Q86SP6 731 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 FAM35AQ86V20 835 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 SCN4BQ8IWT1 228 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 FAM71AQ8IYT1 594 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 UBR7Q8N806 425 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 C12orf76Q8N812 135 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-218ENST00000555213 LEMD2Q8NC56 503 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 SLC2A14Q8TDB8 520 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 WHAMMQ8TF30 809 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 ATXN2LQ8WWM7 1075 aaKnown RBP11.56□□□□□ -0.56
SHMT2-218ENST00000555213 SHC3Q92529 594 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 CEP295NLQ96MC4 621 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 ZNF512Q96ME7 567 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-218ENST00000555213 TWNKQ96RR1 684 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 DMAP1Q9NPF5 467 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-218ENST00000555213 EHD2Q9NZN4 543 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 KIAA1257Q9ULG3 409 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 NENFQ9UMX5 172 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 USP15Q9Y4E8 981 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-218ENST00000555213 ASB3Q9Y575 518 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 NME7Q9Y5B8 376 aa11.56□□□□□ -0.56
SHMT2-218ENST00000555213 NDUFA10O95299 355 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 VNN2O95498 520 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 FGF19O95750 216 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 SERPING1P05155 500 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 VDRP11473 427 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CCDC130P13994 396 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 BDNFP23560 247 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CYP2F1P24903 491 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 ADORA2BP29275 332 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 GRIK1P39086 918 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 STAT1P42224 750 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 MRPS5P82675 430 aaKnown RBP11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CBX2Q14781 532 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-218ENST00000555213 STILQ15468 1287 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CCDC142Q17RM4 750 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 SGO2Q562F6 1265 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 PTCRAQ6ISU1 281 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-218ENST00000555213 FMNL3Q8IVF7 1028 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CCDC170Q8IYT3 715 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 TTC9BQ8N6N2 239 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 SLC4A11Q8NBS3 891 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 SLC30A5Q8TAD4 765 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CYFIP2Q96F07 1278 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 GCNAQ96QF7 691 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 SPAG5Q96R06 1193 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 HNRNPABQ99729 332 aaKnown RBP11.55□□□□□ -0.56
SHMT2-218ENST00000555213 DESI2Q9BSY9 194 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 B3GNT5Q9BYG0 378 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 ZNF518BQ9C0D4 1074 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 S1PR5Q9H228 398 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CRISPLD1Q9H336 500 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 HAUS4Q9H6D7 363 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 ASAH2Q9NR71 780 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 TRMT1Q9NXH9 659 aaKnown RBP11.55□□□□□ -0.56
SHMT2-218ENST00000555213 HESX1Q9UBX0 185 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 CNTN6Q9UQ52 1028 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 PPP2R2CQ9Y2T4 447 aa11.55□□□□□ -0.56
SHMT2-218ENST00000555213 VCANP13611 3396 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 SSU72P8A0A1W2PR75 194 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 EIF3CLB5ME19 914 aaKnown RBP11.54□□□□□ -0.56
SHMT2-218ENST00000555213 MED7O43513 233 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 AP1G2O75843 785 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 SOAT2O75908 522 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 GFPT2O94808 682 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 PAPLNO95428 1278 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 CSH1P0DML2 217 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 CSH2P0DML3 217 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 CHRNB2P17787 502 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ARHGAP25P42331 645 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 CDR1P51861 262 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ZNF132P52740 706 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 BPIFB4P59827 614 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 TFF2Q03403 129 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 PTK2Q05397 1052 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ASIC2Q16515 512 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 PABPC1LQ4VXU2 614 aaKnown RBP11.54□□□□□ -0.56
SHMT2-218ENST00000555213 CYP4A22Q5TCH4 519 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ARHGAP17Q68EM7 881 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 PDZD4Q76G19 769 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-218ENST00000555213 FUKQ8N0W3 1084 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 C12orf29Q8N999 325 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ACRBPQ8NEB7 543 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 PSMG2Q969U7 264 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ZNF707Q96C28 371 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-218ENST00000555213 C8orf48Q96LL4 319 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 EIF3CQ99613 913 aaKnown RBP11.54□□□□□ -0.56
SHMT2-218ENST00000555213 CORO1BQ9BR76 489 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ACP6Q9NPH0 428 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 PRDM6Q9NQX0 595 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 ZNHIT6Q9NWK9 470 aaKnown RBP11.54□□□□□ -0.56
SHMT2-218ENST00000555213 BRWD1Q9NSI6 2320 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 CLUHO75153 1309 aa11.54□□□□□ -0.56
SHMT2-218ENST00000555213 A0A087X0T9 212 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms