RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TOGARAM2Q6ZUX3 1019 aa6.36□□□□□ -1.39
VRK1-203ENST00000555067 ANKRD42Q8N9B4 389 aa6.36□□□□□ -1.39
VRK1-203ENST00000555067 BRIX1Q8TDN6 353 aaKnown RBP6.36□□□□□ -1.39
VRK1-203ENST00000555067 SLC12A5Q9H2X9 1139 aa6.36□□□□□ -1.39
VRK1-203ENST00000555067 LUZP4Q9P127 313 aa6.36□□□□□ -1.39
VRK1-203ENST00000555067 HESX1Q9UBX0 185 aa6.36□□□□□ -1.39
VRK1-203ENST00000555067 SLC16A3O15427 465 aaKnown RBP6.35□□□□□ -1.39
VRK1-203ENST00000555067 PIP5K1CO60331 668 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 LATS1O95835 1130 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 ONECUT2O95948 504 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 MYL3P08590 195 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 ATXN1LP0C7T5 689 aaKnown RBP6.35□□□□□ -1.39
VRK1-203ENST00000555067 HALP42357 657 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 MAP2K6P52564 334 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 PROSER3Q2NL68 480 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 MTX3Q5HYI7 312 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 CYB5RLQ6IPT4 315 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 SKAP1Q86WV1 359 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 PPP1R3BQ86XI6 285 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 SMAP1Q8IYB5 467 aaPredicted RBP6.35□□□□□ -1.39
VRK1-203ENST00000555067 FAM9BQ8IZU0 186 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 PARD3BQ8TEW8 1205 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 PLCB1Q9NQ66 1216 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 PNPOQ9NVS9 261 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 SH3BP4Q9P0V3 963 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 PHTF1Q9UMS5 762 aa6.35□□□□□ -1.39
VRK1-203ENST00000555067 H0YIZ8 118 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 ERC2O15083 957 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 PMM2O15305 246 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 AHSGP02765 367 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 POU2F2P09086 479 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 PRR35P0CG20 571 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 EPHB2P29323 1055 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 PPIFP30405 207 aaKnown RBP6.34□□□□□ -1.39
VRK1-203ENST00000555067 PPM1FP49593 454 aaPredicted RBP6.34□□□□□ -1.39
VRK1-203ENST00000555067 GPR162Q16538 588 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 PGS1Q32NB8 556 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 EMC10Q5UCC4 262 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 LAYNQ6UX15 382 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 CPXCR1Q8N123 301 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 FANCBQ8NB91 859 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 GJA10Q969M2 543 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 REPS1Q96D71 796 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 SLC46A1Q96NT5 459 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 NRIP3Q9NQ35 241 aa6.34□□□□□ -1.39
VRK1-203ENST00000555067 DDX21Q9NR30 783 aaKnown RBP eCLIP6.34□□□□□ -1.39
VRK1-203ENST00000555067 QSOX1O00391 747 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 NBNO60934 754 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 IL33O95760 270 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 PDHA1P08559 390 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 KELP23276 732 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 ZNF134P52741 427 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 EEFSECP57772 596 aaKnown RBP6.33□□□□□ -1.4
VRK1-203ENST00000555067 CHAF1AQ13111 956 aaPredicted RBP6.33□□□□□ -1.4
VRK1-203ENST00000555067 BOP1Q14137 746 aaKnown RBP6.33□□□□□ -1.4
VRK1-203ENST00000555067 C11orf87Q6NUJ2 197 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 C1orf228Q6PIY5 440 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 MAVSQ7Z434 540 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 NEK8Q86SG6 692 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 TTC17Q96AE7 1141 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 ZBTB9Q96C00 473 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 HSPBAP1Q96EW2 488 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 AIFM3Q96NN9 605 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 HERPUD2Q9BSE4 406 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 ZHX3Q9H4I2 956 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 PCDHA1Q9Y5I3 950 aa6.33□□□□□ -1.4
VRK1-203ENST00000555067 ZNF213O14771 459 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 IL6RP08887 468 aaPredicted RBP6.32□□□□□ -1.4
VRK1-203ENST00000555067 VCAM1P19320 739 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 MAN1A1P33908 653 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 PXNP49023 591 aaPredicted RBP6.32□□□□□ -1.4
VRK1-203ENST00000555067 RGS19P49795 217 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 TUBA4AP68366 448 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 EXOSC9Q06265 439 aaKnown RBP6.32□□□□□ -1.4
VRK1-203ENST00000555067 CCDC157Q569K6 752 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 MORN5Q5VZ52 161 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 ZNF626Q68DY1 528 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 RUNDC1Q96C34 613 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 MOGAT1Q96PD6 335 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 TTYH3Q9C0H2 523 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 AS3MTQ9HBK9 375 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 DLL3Q9NYJ7 618 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 NRBP1Q9UHY1 535 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 SCINQ9Y6U3 715 aa6.32□□□□□ -1.4
VRK1-203ENST00000555067 CFAP69A5D8W1 941 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 DCLK1O15075 740 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 DNAJB5O75953 348 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 AKAP5P24588 427 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 CYP2C18P33260 490 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 PTGER1P34995 402 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 CLCN2P51788 898 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 NKX6-1P78426 367 aaPredicted RBP6.31□□□□□ -1.4
VRK1-203ENST00000555067 STK3Q13188 491 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 IQCB1Q15051 598 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 AMOTQ4VCS5 1084 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 ALFQ53S48 1182 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 TREML2Q5T2D2 321 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 PRAMEF17Q5VTA0 474 aa6.31□□□□□ -1.4
VRK1-203ENST00000555067 CCDC70Q6NSX1 233 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms