RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ANXA13P27216 316 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 MATR3P43243 847 aaKnown RBP eCLIP17.08■□□□□ 0.322e-6■■■■□ 26.1
ACTN1-209ENST00000553659 AARSP49588 968 aaKnown RBP eCLIP17.08■□□□□ 0.32
ACTN1-209ENST00000553659 ARHGAP8P85298 464 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 PLD1Q13393 1074 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 SPA17Q15506 151 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 WDR59Q6PJI9 974 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 GBP6Q6ZN66 633 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 MTERF4Q7Z6M4 381 aaKnown RBP17.08■□□□□ 0.32
ACTN1-209ENST00000553659 SHKBP1Q8TBC3 707 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 KCNN1Q92952 543 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 LSM14BQ9BX40 385 aaKnown RBP17.08■□□□□ 0.32
ACTN1-209ENST00000553659 LRRC3Q9BY71 257 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 HAPLN2Q9GZV7 340 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
ACTN1-209ENST00000553659 UBQLN1Q9UMX0 589 aaKnown RBP17.08■□□□□ 0.32
ACTN1-209ENST00000553659 YIPF1Q9Y548 306 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 TIMM13Q9Y5L4 95 aaPredicted RBP17.08■□□□□ 0.32
ACTN1-209ENST00000553659 FRYLO94915 3013 aa17.08■□□□□ 0.32
ACTN1-209ENST00000553659 HEPACAM2A8MVW5 462 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 ARNTLO00327 626 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 KRT86O43790 486 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 VNN2O95498 520 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 CHRNB1P11230 501 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 KRT13P13646 458 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 TGM1P22735 817 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 KLK7P49862 253 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 CCR3P51677 355 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 LMNB2Q03252 620 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 ENPEPQ07075 957 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 KCNMA1Q12791 1236 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 GPR17Q13304 367 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-209ENST00000553659 EXOC3L4Q17RC7 722 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 INTS8Q75QN2 995 aaKnown RBP17.07■□□□□ 0.32
ACTN1-209ENST00000553659 USP37Q86T82 979 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 TMEM130Q8N3G9 435 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 CELF5Q8N6W0 485 aaKnown RBP17.07■□□□□ 0.32
ACTN1-209ENST00000553659 BAP1Q92560 729 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 KIF12Q96FN5 646 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 PGLYRP2Q96PD5 576 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 CHP1Q99653 195 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 DEF6Q9H4E7 631 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 GMEB2Q9UKD1 530 aa17.07■□□□□ 0.32
ACTN1-209ENST00000553659 KIF26AQ9ULI4 1882 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-209ENST00000553659 NCANO14594 1321 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 OR6C75A6NL08 312 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 P4HA2O15460 535 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 XPOTO43592 962 aaKnown RBP17.06■□□□□ 0.32
ACTN1-209ENST00000553659 OR4Q2P0C623 313 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
ACTN1-209ENST00000553659 EPHB3P54753 998 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 CETN1Q12798 172 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 DUSP4Q13115 394 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 KYAT1Q16773 422 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 ZC2HC1CQ53FD0 456 aaPredicted RBP17.06■□□□□ 0.32
ACTN1-209ENST00000553659 SFMBT2Q5VUG0 894 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 C1orf228Q6PIY5 440 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 DSTYKQ6XUX3 929 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 RRAGAQ7L523 313 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 HAUS6Q7Z4H7 955 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 KIAA1328Q86T90 577 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 YAF2Q8IY57 180 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 CSGALNACT1Q8TDX6 532 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 SLC35C1Q96A29 364 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 BICD1Q96G01 975 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 MSANTD3Q96H12 275 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 TSPAN18Q96SJ8 248 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 SLITRK6Q9H5Y7 841 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 RAB23Q9ULC3 237 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 BZW2Q9Y6E2 419 aaKnown RBP17.06■□□□□ 0.32
ACTN1-209ENST00000553659 DENND4CQ5VZ89 1909 aa17.06■□□□□ 0.32
ACTN1-209ENST00000553659 SCN1AP35498 2009 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 A0A1W2PRU2 124 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 LRRC53A6NM62 1247 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 LACTBL1A8MY62 500 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 CLIC2O15247 247 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 CHADO15335 359 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 EXOC3O60645 756 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 LCA5LO95447 670 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 SERPING1P05155 500 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 TYMPP19971 482 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 TNFSF9P41273 254 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 ALDH1A3P47895 512 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 CXCL12P48061 93 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 TUBB4BP68371 445 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 DCAF17Q5H9S7 520 aaPredicted RBP17.05■□□□□ 0.32
ACTN1-209ENST00000553659 TCERG1LQ5VWI1 586 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 TMC8Q8IU68 726 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 ACRBPQ8NEB7 543 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 CRISPLD1Q9H336 500 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 CDV3Q9UKY7 258 aaKnown RBP17.05■□□□□ 0.32
ACTN1-209ENST00000553659 USP18Q9UMW8 372 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 ASB3Q9Y575 518 aa17.05■□□□□ 0.32
ACTN1-209ENST00000553659 ZNF638Q14966 1978 aaKnown RBP17.05■□□□□ 0.32
ACTN1-209ENST00000553659 KIAA0391O15091 583 aaKnown RBP17.04■□□□□ 0.32
ACTN1-209ENST00000553659 ADRB2P07550 413 aa17.04■□□□□ 0.32
ACTN1-209ENST00000553659 LIG4P49917 911 aa17.04■□□□□ 0.32
ACTN1-209ENST00000553659 VAV2P52735 878 aa17.04■□□□□ 0.32
ACTN1-209ENST00000553659 KCNA1Q09470 495 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms