RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 RASSF3Q86WH2 238 aa16.08■□□□□ 0.16
APEX1-204ENST00000553368 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
APEX1-204ENST00000553368 GLIS3Q8NEA6 775 aa16.08■□□□□ 0.16
APEX1-204ENST00000553368 CCDC26Q8TAB7 109 aa16.08■□□□□ 0.16
APEX1-204ENST00000553368 USP33Q8TEY7 942 aa16.08■□□□□ 0.16
APEX1-204ENST00000553368 ANGPTL2Q9UKU9 493 aa16.08■□□□□ 0.16
APEX1-204ENST00000553368 NME7Q9Y5B8 376 aa16.08■□□□□ 0.16
APEX1-204ENST00000553368 LEFTY2O00292 366 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 OLFM2O95897 454 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 CST3P01034 146 aaPredicted RBP16.07■□□□□ 0.16
APEX1-204ENST00000553368 PDGFRBP09619 1106 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 PPP3CCP48454 512 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 DGKEP52429 567 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 SLC7A9P82251 487 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 PSMD2Q13200 908 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 WDR49Q8IV35 697 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 TTC16Q8NEE8 873 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 NOC3LQ8WTT2 800 aaKnown RBP16.07■□□□□ 0.16
APEX1-204ENST00000553368 PCED1BQ96HM7 432 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 CHAMP1Q96JM3 812 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 C8orf48Q96LL4 319 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 TNMDQ9H2S6 317 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 KIAA1586Q9HCI6 787 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 HSPBP1Q9NZL4 362 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 TRPM5Q9NZQ8 1165 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 R3HCC1Q9Y3T6 440 aaKnown RBP16.07■□□□□ 0.16
APEX1-204ENST00000553368 CHD8Q9HCK8 2581 aa16.07■□□□□ 0.16
APEX1-204ENST00000553368 ZNF840PA6NDX5 716 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 TRIM66O15016 1216 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 TACC1O75410 805 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 KCNK5O95279 499 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 CAVIN2O95810 425 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 KCNA4P22459 653 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 GRIK1P39086 918 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 NOP14P78316 857 aaKnown RBP16.06■□□□□ 0.16
APEX1-204ENST00000553368 E2F4Q16254 413 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 PMS2CLQ68D20 193 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 RNF43Q68DV7 783 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 TCEAL6Q6IPX3 200 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 STXBP4Q6ZWJ1 553 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 EPM2AIP1Q7L775 607 aaPredicted RBP16.06■□□□□ 0.16
APEX1-204ENST00000553368 C11orf74Q86VG3 221 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 ADGRG2Q8IZP9 1017 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 ZNF507Q8TCN5 953 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 TCEAL3Q969E4 200 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 RNF38Q9H0F5 515 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 KBTBD4Q9NVX7 518 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 MTMR6Q9Y217 621 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 ABCA7Q8IZY2 2146 aa16.06■□□□□ 0.16
APEX1-204ENST00000553368 ANTXRLA6NF34 631 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 EIF3DO15371 548 aaKnown RBP eCLIP16.05■□□□□ 0.165e-15■■□□□ 13.2
APEX1-204ENST00000553368 OAS1P00973 400 aaKnown RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 CYP17A1P05093 508 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 CHRM1P11229 460 aaPredicted RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 NASPP49321 788 aaPredicted RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 MRPS21P82921 87 aaKnown RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 CYP27A1Q02318 531 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 CREB5Q02930 508 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 USP39Q53GS9 565 aaKnown RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 CNNM4Q6P4Q7 775 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 PDILTQ8N807 584 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 TSTD1Q8NFU3 115 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 CNOT6LQ96LI5 555 aaKnown RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 MMS19Q96T76 1030 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 EDEM2Q9BV94 578 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 TRIM9Q9C026 710 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 LRRC27Q9C0I9 530 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 ZSCAN16Q9H4T2 348 aaPredicted RBP16.05■□□□□ 0.16
APEX1-204ENST00000553368 MMP17Q9ULZ9 603 aa16.05■□□□□ 0.16
APEX1-204ENST00000553368 NUP205Q92621 2012 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 LAMA1P25391 3075 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 F8VP50 259 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 TGFB1I1O43294 461 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 STAU1O95793 577 aaKnown RBP16.04■□□□□ 0.16
APEX1-204ENST00000553368 ANXA13P27216 316 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
APEX1-204ENST00000553368 EIF2DP41214 584 aaKnown RBP16.04■□□□□ 0.16
APEX1-204ENST00000553368 PSMD6Q15008 389 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 DHCR24Q15392 516 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 CRY1Q16526 586 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 C2orf27AQ580R0 203 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 MDH1BQ5I0G3 518 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 LINC00301Q8NCQ3 95 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 OLIG1Q8TAK6 271 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
APEX1-204ENST00000553368 TPSD1Q9BZJ3 242 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 CUEDC2Q9H467 287 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 CPQQ9Y646 472 aa16.04■□□□□ 0.16
APEX1-204ENST00000553368 A0A0A0MRY4 1105 aa16.03■□□□□ 0.16
APEX1-204ENST00000553368 SLC9A3R1O14745 358 aaPredicted RBP16.03■□□□□ 0.16
APEX1-204ENST00000553368 PTPN1P18031 435 aaKnown RBP16.03■□□□□ 0.16
APEX1-204ENST00000553368 GBP1P32455 592 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms