RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 TADA3O75528 432 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 FGF19O95750 216 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 CALCAP01258 141 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 FAM200BP0CF97 657 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 ATP1A3P13637 1013 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 CD19P15391 556 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 CDC25CP30307 473 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 MAP3K7CLP57077 242 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 IFRD2Q12894 506 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-226ENST00000553011 HTR4Q13639 388 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 ARHGAP44Q17R89 818 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 ARHGAP17Q68EM7 881 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 PARM1Q6UWI2 310 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 CLEC20AQ6ZU45 233 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 DENND5BQ6ZUT9 1274 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 RBBP8NLQ8NC74 664 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-226ENST00000553011 FGF14Q92915 247 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 JAKMIP2Q96AA8 810 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 TRMT2BQ96GJ1 504 aaKnown RBP14.96□□□□□ -0.01
PTCH1-226ENST00000553011 MYRFLQ96LU7 910 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 SLITRK6Q9H5Y7 841 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 CSNK1G1Q9HCP0 422 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 APEX2Q9UBZ4 518 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 MUC3AQ02505 3323 aa14.96□□□□□ -0.01
PTCH1-226ENST00000553011 SMTNL1A8MU46 457 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 ANHXE9PGG2 379 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 TPM2P07951 284 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 PTPN21Q16825 1174 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 SGO2Q562F6 1265 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 FAM78AQ5JUQ0 283 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 GPR158Q5T848 1215 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 APTXQ7Z2E3 356 aaKnown RBP14.95□□□□□ -0.02
PTCH1-226ENST00000553011 ANKRD20A12PQ8NF67 263 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 SCAMP5Q8TAC9 235 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 TFAP2BQ92481 460 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 CEP295NLQ96MC4 621 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 GCNAQ96QF7 691 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 ZSWIM1Q9BR11 485 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 RPP25Q9BUL9 199 aaKnown RBP14.95□□□□□ -0.02
PTCH1-226ENST00000553011 TTLL2Q9BWV7 592 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 LSM14BQ9BX40 385 aaKnown RBP14.95□□□□□ -0.02
PTCH1-226ENST00000553011 SMOC2Q9H3U7 446 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 CBX8Q9HC52 389 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 IGSF9Q9P2J2 1179 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 UXTQ9UBK9 157 aaPredicted RBP14.95□□□□□ -0.02
PTCH1-226ENST00000553011 NUMBLQ9Y6R0 609 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 ZDBF2Q9HCK1 2354 aa14.95□□□□□ -0.02
PTCH1-226ENST00000553011 BECN2A8MW95 431 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 TNFRSF10BO14763 440 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 DCXO43602 365 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 PAEPP09466 180 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 VDRP11473 427 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 KRT5P13647 590 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 NPR3P17342 541 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 FCARP24071 287 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 KLK7P49862 253 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 ZNF132P52740 706 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 SLC5A3P53794 718 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 MFAP3P55082 362 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 GOLGA7BQ2TAP0 167 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 ARHGAP15Q53QZ3 475 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 ENOSF1Q7L5Y1 443 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 GPRIN1Q7Z2K8 1008 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 TTC30AQ86WT1 665 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 GPIHBP1Q8IV16 184 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 NUP93Q8N1F7 819 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 ZSCAN18Q8TBC5 510 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-226ENST00000553011 ASB16Q96NS5 453 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 KXD1Q9BQD3 176 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 DUSP16Q9BY84 665 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 DNAJC12Q9UKB3 198 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 TSPAN16Q9UKR8 245 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 SORCS3Q9UPU3 1222 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 CNTN6Q9UQ52 1028 aa14.94□□□□□ -0.02
PTCH1-226ENST00000553011 F5P12259 2224 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 LRRC10BA6NIK2 292 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 LGALS16A8MUM7 142 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 HHLA1C9JL84 531 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 O00370 1275 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 BRD2P25440 801 aaKnown RBP14.93□□□□□ -0.02
PTCH1-226ENST00000553011 USP8P40818 1118 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 TAF10Q12962 218 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 FKBP15Q5T1M5 1219 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 KLHDC7AQ5VTJ3 777 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 TXNDC8Q6A555 127 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 TANGO2Q6ICL3 276 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 MTSS1LQ765P7 747 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 LUZP1Q86V48 1076 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 SLC44A3Q8N4M1 653 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 SHC3Q92529 594 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 MRPS31Q92665 395 aaKnown RBP14.93□□□□□ -0.02
PTCH1-226ENST00000553011 SMARCD2Q92925 531 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 FBXO32Q969P5 355 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 FAM81BQ96LP2 452 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 SLC46A2Q9BY10 475 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 PLA2G2FQ9BZM2 168 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 GPR88Q9GZN0 384 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 EPHX3Q9H6B9 360 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 TASP1Q9H6P5 420 aa14.93□□□□□ -0.02
PTCH1-226ENST00000553011 KIAA1257Q9ULG3 409 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms