RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 NOTCH2Q04721 2471 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SIM2Q14190 667 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 MCM6Q14566 821 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SF3A1Q15459 793 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SURF1Q15526 300 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 MAPRE1Q15691 268 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 E2F4Q16254 413 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 LPAL2Q16609 132 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 BMT2Q1RMZ1 405 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SOWAHAQ2M3V2 549 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 GAB4Q2WGN9 574 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 HSF5Q4G112 596 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC39A12Q504Y0 691 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 ZC2HC1CQ53FD0 456 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 INTS6LQ5JSJ4 861 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SPDYCQ5MJ68 293 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 GPR158Q5T848 1215 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 FOXD4L5Q5VV16 416 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 WSCD1Q658N2 575 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 LARP1BQ659C4 914 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 FSTL4Q6MZW2 842 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CCDC73Q6ZRK6 1079 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 Q6ZS52 159 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 USP49Q70CQ1 688 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CEP68Q76N32 757 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EPM2AIP1Q7L775 607 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 C11orf74Q86VG3 221 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 METTL23Q86XA0 190 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 C12orf56Q8IXR9 622 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 PDCL2Q8N4E4 241 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 KRI1Q8N9T8 703 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 ST13P5Q8NFI4 369 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 RIN3Q8TB24 985 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 OSCP1Q8WVF1 389 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 KBTBD7Q8WVZ9 684 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 GAB3Q8WWW8 586 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 FOXD4L4Q8WXT5 416 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EZH1Q92800 747 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EXOC4Q96A65 974 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 BICD1Q96G01 975 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EPSTI1Q96J88 318 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 PGLYRP2Q96PD5 576 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 UBL7Q96S82 380 aaPredicted RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 TNMDQ9H2S6 317 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CUEDC2Q9H467 287 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CLMPQ9H6B4 373 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 KIAA1586Q9HCI6 787 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 RXFP3Q9NSD7 469 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 TMLHEQ9NVH6 421 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 GTSE1Q9NYZ3 720 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 IL37Q9NZH6 218 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 CCDC39Q9UFE4 941 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SIX4Q9UIU6 781 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 NDRG2Q9UN36 371 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 L1RE1Q9UN81 338 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 EXOC7Q9UPT5 735 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 WASF3Q9UPY6 502 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SMC3Q9UQE7 1217 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC27A5Q9Y2P5 690 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 NEUROG3Q9Y4Z2 214 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 MYO16Q9Y6X6 1858 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 ITPR3Q14573 2671 aa4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 HELZP42694 1942 aaKnown RBP4.76□□□□□ -1.65
TMEM106C-220ENST00000552561 ZNF638Q14966 1978 aaKnown RBP4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC38A8A6NNN8 435 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 ENO4A6NNW6 628 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 TISP43B9A030 160 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 H3BQV1 296 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 PPP6R2O75170 966 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 ZDHHC11BP0C7U3 371 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 SYT1P21579 422 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 WARSP23381 471 aaKnown RBP4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 GJA4P35212 333 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 HOXD12P35452 270 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 AVPR1AP37288 418 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 FNTBP49356 437 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 TUBP50607 506 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 CASP5P51878 434 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 KPNA1P52294 538 aaPredicted RBP4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 NUCB2P80303 420 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 SLC7A9P82251 487 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 RBP5P82980 135 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 MYL7Q01449 175 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 TSPY1Q01534 308 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 ENPEPQ07075 957 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 SPAG1Q07617 926 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 TNK2Q07912 1038 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 KCNA1Q09470 495 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 RAD51AP2Q09MP3 1159 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 GRSF1Q12849 480 aaKnown RBP eCLIP4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 RESTQ13127 1097 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 PSMD2Q13200 908 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 MTF1Q14872 753 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 COL28A1Q2UY09 1125 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 EML3Q32P44 896 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 MGAT5BQ3V5L5 792 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 PLK5Q496M5 336 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 STPG1Q5TH74 334 aa4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 PEAR1Q5VY43 1037 aaPredicted RBP4.75□□□□□ -1.65
TMEM106C-220ENST00000552561 CLEC17AQ6ZS10 378 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms