RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 CNTN6Q9UQ52 1028 aa17.35■□□□□ 0.37
GCN1-209ENST00000551920 PCDHB4Q9Y5E5 795 aa17.35■□□□□ 0.37
GCN1-209ENST00000551920 NCANO14594 1321 aa17.35■□□□□ 0.37
GCN1-209ENST00000551920 BECN2A8MW95 431 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 HHLA1C9JL84 531 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 TNFRSF10AO00220 468 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 TNFRSF10BO14763 440 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 FAM200BP0CF97 657 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 ANXA13P27216 316 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 SLC5A3P53794 718 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 MAP3K7CLP57077 242 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 TAF12Q16514 161 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 PARM1Q6UWI2 310 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 DENND5BQ6ZUT9 1274 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 TTC30AQ86WT1 665 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 PATJQ8NI35 1801 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 CEP295NLQ96MC4 621 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 RPP25Q9BUL9 199 aaKnown RBP17.34■□□□□ 0.37
GCN1-209ENST00000551920 LSM14BQ9BX40 385 aaKnown RBP17.34■□□□□ 0.37
GCN1-209ENST00000551920 ATXN3LQ9H3M9 355 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 KCNK12Q9HB15 430 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 GDE1Q9NZC3 331 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 NUMBLQ9Y6R0 609 aa17.34■□□□□ 0.37
GCN1-209ENST00000551920 LRRC10BA6NIK2 292 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 O00370 1275 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 EPHB6O15197 1021 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 PAEPP09466 180 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 PNMA6AP0CW24 399 aaPredicted RBP17.33■□□□□ 0.36
GCN1-209ENST00000551920 NPR3P17342 541 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 BRD2P25440 801 aaKnown RBP17.33■□□□□ 0.36
GCN1-209ENST00000551920 PTPN21Q16825 1174 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 GOLGA7BQ2TAP0 167 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 FAM78AQ5JUQ0 283 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 SCAMP5Q8TAC9 235 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 SHC3Q92529 594 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 JAKMIP2Q96AA8 810 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 ASB16Q96NS5 453 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 GPR88Q9GZN0 384 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 ACP6Q9NPH0 428 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 SIK3Q9Y2K2 1263 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 FHOD1Q9Y613 1164 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 ZFP37Q9Y6Q3 630 aaPredicted RBP17.33■□□□□ 0.36
GCN1-209ENST00000551920 GREB1Q4ZG55 1949 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 OBSL1O75147 1896 aa17.33■□□□□ 0.36
GCN1-209ENST00000551920 DLL1O00548 723 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 FGF19O95750 216 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 KRT5P13647 590 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 CD19P15391 556 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 TRIM21P19474 475 aaKnown RBP17.32■□□□□ 0.36
GCN1-209ENST00000551920 CDC25CP30307 473 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 ARHGAP44Q17R89 818 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 SGO2Q562F6 1265 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 GPR158Q5T848 1215 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 KLHDC7AQ5VTJ3 777 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 ENOSF1Q7L5Y1 443 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 ZSCAN18Q8TBC5 510 aaPredicted RBP17.32■□□□□ 0.36
GCN1-209ENST00000551920 RSPRY1Q96DX4 576 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 KXD1Q9BQD3 176 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 NAA15Q9BXJ9 866 aaKnown RBP17.32■□□□□ 0.36
GCN1-209ENST00000551920 DUSP16Q9BY84 665 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 GANQ9H2C0 597 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 IL37Q9NZH6 218 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 DNAJC12Q9UKB3 198 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 TSPAN16Q9UKR8 245 aa17.32■□□□□ 0.36
GCN1-209ENST00000551920 SMTNL1A8MU46 457 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 TULP2O00295 520 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 PRAMEF12O95522 483 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 VDRP11473 427 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
GCN1-209ENST00000551920 PGFP49763 221 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 MFAP3P55082 362 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 IFRD2Q12894 506 aaPredicted RBP17.31■□□□□ 0.36
GCN1-209ENST00000551920 PKDCCQ504Y2 493 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 NUP93Q8N1F7 819 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 GCNAQ96QF7 691 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 SLITRK6Q9H5Y7 841 aa17.31■□□□□ 0.36
GCN1-209ENST00000551920 UXTQ9UBK9 157 aaPredicted RBP17.31■□□□□ 0.36
GCN1-209ENST00000551920 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
GCN1-209ENST00000551920 FAM92AA1XBS5 289 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 DCXO43602 365 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 UCHL3P15374 230 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 TAF10Q12962 218 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 SYCP1Q15431 976 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 TXNDC8Q6A555 127 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 TANGO2Q6ICL3 276 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 ANKRD52Q8NB46 1076 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 ANKRD20A12PQ8NF67 263 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 SMARCD2Q92925 531 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 SLC22A12Q96S37 553 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 SLC46A2Q9BY10 475 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 PLA2G2FQ9BZM2 168 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 DNAI2Q9GZS0 605 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
GCN1-209ENST00000551920 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 PNPLA8Q9NP80 782 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 PLCB1Q9NQ66 1216 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 FAM207AQ9NSI2 230 aaPredicted RBP17.3■□□□□ 0.36
GCN1-209ENST00000551920 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
GCN1-209ENST00000551920 SORCS3Q9UPU3 1222 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms