RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ADAM32Q8TC27 787 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 LRRC15Q8TF66 581 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 KIF2CQ99661 725 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 FSCN3Q9NQT6 498 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 EHD2Q9NZN4 543 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 APC2O95996 2303 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 ASXL3Q9C0F0 2248 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 LAD1O00515 517 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 ADH1CP00326 375 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 CYP2F1P24903 491 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 KIR2DL1P43626 348 aaPredicted RBP16.42■□□□□ 0.22
CACNB3-220ENST00000551716 NCKAP1LP55160 1127 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 RAD51AP2Q09MP3 1159 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 DHCR24Q15392 516 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 GAB4Q2WGN9 574 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 NT5DC4Q86YG4 428 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 SYT2Q8N9I0 419 aaPredicted RBP16.42■□□□□ 0.22
CACNB3-220ENST00000551716 FUBP3Q96I24 572 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACNB3-220ENST00000551716 CEP295NLQ96MC4 621 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 CAMK1GQ96NX5 476 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 UBL7Q96S82 380 aaPredicted RBP16.42■□□□□ 0.22
CACNB3-220ENST00000551716 ARHGEF4Q9NR80 690 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 TMLHEQ9NVH6 421 aa16.42■□□□□ 0.22
CACNB3-220ENST00000551716 ZNF638Q14966 1978 aaKnown RBP16.41■□□□□ 0.22
CACNB3-220ENST00000551716 C2orf78A6NCI8 922 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 LEFTY2O00292 366 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 ADAM23O75077 832 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 GJB3O75712 270 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 CYP17A1P05093 508 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 PPP3CCP48454 512 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 MYL7Q01449 175 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 RESTQ13127 1097 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 GNL2Q13823 731 aaKnown RBP16.41■□□□□ 0.22
CACNB3-220ENST00000551716 ME3Q16798 604 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 PLEKHG6Q3KR16 790 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 CFAP221Q4G0U5 840 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 ZC2HC1CQ53FD0 456 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-220ENST00000551716 TMPRSS7Q7RTY8 843 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 SPATA2LQ8IUW3 424 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-220ENST00000551716 SCUBE3Q8IX30 993 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 TMEM86AQ8N2M4 240 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 PNMA5Q96PV4 448 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 TRPM5Q9NZQ8 1165 aa16.41■□□□□ 0.22
CACNB3-220ENST00000551716 URB1O60287 2271 aaKnown RBP16.41■□□□□ 0.22
CACNB3-220ENST00000551716 A0A087WV48 116 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 HUS1O60921 280 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 SLC6A11P48066 632 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 ATP2C1P98194 919 aaPredicted RBP16.4■□□□□ 0.22
CACNB3-220ENST00000551716 INTS6LQ5JSJ4 861 aaKnown RBP16.4■□□□□ 0.22
CACNB3-220ENST00000551716 WDR45BQ5MNZ6 344 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 EMC10Q5UCC4 262 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 SLFN12LQ6IEE8 588 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 DTHD1Q6ZMT9 781 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 DEFB119Q8N690 84 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 TRIML1Q8N9V2 468 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 STKLD1Q8NE28 680 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 FOXJ1Q92949 421 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 DDX43Q9NXZ2 648 aaKnown RBP16.4■□□□□ 0.22
CACNB3-220ENST00000551716 TBC1D14Q9P2M4 693 aa16.4■□□□□ 0.22
CACNB3-220ENST00000551716 TBC1D3BA6NDS4 549 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 JAK2O60674 1132 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-220ENST00000551716 PRPHP41219 470 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 MAGEA11P43364 429 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 SLC7A9P82251 487 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 GUCY1B3Q02153 619 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 SDE2Q6IQ49 451 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 RHBDF2Q6PJF5 856 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 KCNK18Q7Z418 384 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 SLCO6A1Q86UG4 719 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 DDX42Q86XP3 938 aaKnown RBP eCLIP16.39■□□□□ 0.21
CACNB3-220ENST00000551716 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 RGL4Q8IZJ4 473 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 GALNT15Q8N3T1 639 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 PDCL2Q8N4E4 241 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 LSM14AQ8ND56 463 aaKnown RBP16.39■□□□□ 0.21
CACNB3-220ENST00000551716 OR2I1PQ8NGU4 316 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 ZNF419Q96HQ0 510 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-220ENST00000551716 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 SPATA17Q96L03 361 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 ODF2LQ9ULJ1 636 aa16.39■□□□□ 0.21
CACNB3-220ENST00000551716 ANTXRLA6NF34 631 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 CBFA2T3O75081 653 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 NDUFS2O75306 463 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 GABRG2P18507 467 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 PCSK1P29120 753 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 LHX1P48742 406 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 ACOT2P49753 483 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 SLC12A3P55017 1021 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 ANAPC15P60006 121 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 ZRSR1Q15695 479 aaKnown RBP16.38■□□□□ 0.21
CACNB3-220ENST00000551716 BTBD8Q5XKL5 378 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 ADALQ6DHV7 355 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 C4orf50Q6ZRC1 276 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 HSPA12BQ96MM6 686 aa16.38■□□□□ 0.21
CACNB3-220ENST00000551716 CDC6Q99741 560 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms