RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 ABCA7Q8IZY2 2146 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 LEFTY2O00292 366 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 SEC24BO95487 1268 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 ADH1CP00326 375 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 LDHAP00338 332 aaKnown RBP11.86□□□□□ -0.51
PFDN5-212ENST00000550880 KRT19P08727 400 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 GRIK1P39086 918 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 EIF2DP41214 584 aaKnown RBP11.86□□□□□ -0.51
PFDN5-212ENST00000550880 PTGER3P43115 390 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 MAGEA11P43364 429 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 TNFRSF4P43489 277 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 RBP5P82980 135 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 RESTQ13127 1097 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 SEMA3BQ13214 749 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 ZC2HC1CQ53FD0 456 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-212ENST00000550880 VSTM1Q6UX27 236 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 TMEM92Q6UXU6 159 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 SLC36A4Q6YBV0 504 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 TRMT11Q7Z4G4 463 aaKnown RBP11.86□□□□□ -0.51
PFDN5-212ENST00000550880 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 PIP4P1Q86T03 277 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 ADGRF2Q8IZF7 708 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 ADGRG2Q8IZP9 1017 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 CSGALNACT2Q8N6G5 542 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 LRRC15Q8TF66 581 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 HMGB4Q8WW32 186 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 HVCN1Q96D96 273 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 SPATA17Q96L03 361 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 FNBP1Q96RU3 617 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 FAM213AQ9BRX8 229 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 ST6GALNAC4Q9H4F1 302 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 TMEM74BQ9NUR3 256 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 GDAP2Q9NXN4 497 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 PILRBQ9UKJ0 227 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 ITGA11Q9UKX5 1188 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 PCDHB9Q9Y5E1 797 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 SNX9Q9Y5X1 595 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 IGF2RP11717 2491 aa11.86□□□□□ -0.51
PFDN5-212ENST00000550880 TCRBV21S2A2A0A5A6 115 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 TISP43B9A030 160 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 H3BQV1 296 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 SGK1O00141 431 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 KAT7O95251 611 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 ABL1P00519 1130 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 CYP17A1P05093 508 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 SYPP08247 313 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 SERPINF2P08697 491 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 ITPKAP23677 461 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 GRIA2P42262 883 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 RPL6Q02878 288 aaKnown RBP11.85□□□□□ -0.51
PFDN5-212ENST00000550880 MYO1EQ12965 1108 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 MCM6Q14566 821 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 DHCR24Q15392 516 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 CRELD2Q6UXH1 353 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-212ENST00000550880 DENND5BQ6ZUT9 1274 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 DDX42Q86XP3 938 aaKnown RBP eCLIP11.85□□□□□ -0.51
PFDN5-212ENST00000550880 IL17RCQ8NAC3 791 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 RAD54LQ92698 747 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 PKMYT1Q99640 499 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 ARHGEF4Q9NR80 690 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 TBC1D14Q9P2M4 693 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 SCN1AP35498 2009 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 DENND4CQ5VZ89 1909 aa11.85□□□□□ -0.51
PFDN5-212ENST00000550880 ATXN2Q99700 1313 aaKnown RBP11.85□□□□□ -0.51
PFDN5-212ENST00000550880 ZZEF1O43149 2961 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 A0A0A0MRY4 1105 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 FAM221BA6H8Z2 402 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 GABRDO14764 452 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 TRIM66O15016 1216 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 PLCG1P19174 1290 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 SLC6A11P48066 632 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 SLC7A9P82251 487 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 MAP7D1Q3KQU3 841 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 PEAR1Q5VY43 1037 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-212ENST00000550880 BTBD8Q5XKL5 378 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 FAM171BQ6P995 826 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 DPH6Q7L8W6 267 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 ZNF720Q7Z2F6 126 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 SYCP3Q8IZU3 236 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 CHCHD4Q8N4Q1 142 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 C1orf127Q8N9H9 656 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 LARP4BQ92615 738 aaKnown RBP11.84□□□□□ -0.51
PFDN5-212ENST00000550880 FIZ1Q96SL8 496 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 MRPL44Q9H9J2 332 aaKnown RBP11.84□□□□□ -0.51
PFDN5-212ENST00000550880 BLOC1S4Q9NUP1 217 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 RBAKQ9NYW8 714 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-212ENST00000550880 MBD1Q9UIS9 605 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-212ENST00000550880 CDH9Q9ULB4 789 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 CPQQ9Y646 472 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 SPEGQ15772 3267 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 TCHHQ07283 1943 aa11.84□□□□□ -0.51
PFDN5-212ENST00000550880 ANK1P16157 1881 aa11.83□□□□□ -0.52
PFDN5-212ENST00000550880 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
PFDN5-212ENST00000550880 TBC1D3BA6NDS4 549 aa11.83□□□□□ -0.52
PFDN5-212ENST00000550880 ZNF840PA6NDX5 716 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms